Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01630 ATGGCGAGCAGAAGCGGTACCCAAGAAAGCATTGGCAAACCAATAAGATGCAAAGCTGCAATATGCAGAAAATCAGGCGAGCCTCTTGTTATAGAGGAAGTTGAGTTAGACCCACCAAAAGCCTGGGAGGTCCGCATCAAGATTTTATGCACTTCTCTCTGCCACTCTGATGTAACCTTTTGGAAAATGGATCCATCATTCCCAGCTGCTAAATTTCCAAGAATTTTTGGACACGAAGCTGTGGGAGTTGTGGAGAGCGTTGGGGAGCATGTGGAAGAAATTAAAGAGGGAGAGTTAGTGGTGCCGGTGTTCCTTCCAAACTGTGGAGAATGCAAAGATTGTGAGAGCAGAAAGAGTAACGTGTGTACTAAGTTTGGGAACAAACTGATTCATGACATGCCAAGAGACGGGACCAGCAGGTTTAGGGACCTCAAAGGAGACGTGGTGCATCATTTTTTGTGTGTTAGCAGCTTCTCAGAGTACACCGTTGTGGATGTGACCCATGTGGTTAAAATTAGCCATCATGTTCCCATTGATAAGGCTTGCTTGCTCAGTTGCGGTGTTTCAACAGGGGTTGGTGCAGCATGGAAGGCGGGAGACGTGGAAAAAGGGTCCACAGTGGCTATTTTTGGGCTCGGTGCTGTGGGCCTCGCTGTTGCTGTAGCAGCAAAGCAACGAGGAGCGTCAAAGATCATAGGCATCGATCTAAATCATGAAAAATTTGAAATAGGAAAAAGATTTGGAGTAACTGATTTTGTGAATCCTTCCATTTGCAAGGAGAAGTCGGTGAGTGAGGTCAGTTATTATCATTGA 813 0.4588 MASRSGTQESIGKPIRCKAAICRKSGEPLVIEEVELDPPKAWEVRIKILCTSLCHSDVTFWKMDPSFPAAKFPRIFGHEAVGVVESVGEHVEEIKEGELVVPVFLPNCGECKDCESRKSNVCTKFGNKLIHDMPRDGTSRFRDLKGDVVHHFLCVSSFSEYTVVDVTHVVKISHHVPIDKACLLSCGVSTGVGAAWKAGDVEKGSTVAIFGLGAVGLAVAVAAKQRGASKIIGIDLNHEKFEIGKRFGVTDFVNPSICKEKSVSEVSYYH. 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01630 270 Gene3D - 21 190 - -
Seca3g01630 270 FunFam S-(hydroxymethyl)glutathione dehydrogenase 191 269 - -
Seca3g01630 270 PANTHER ALCOHOL DEHYDROGENASE 12 266 - -
Seca3g01630 270 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 77 91 IPR002328 GO:0008270|GO:0016491
Seca3g01630 270 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 176 257 IPR036291 -
Seca3g01630 270 FunFam alcohol dehydrogenase 1-like isoform X1 25 190 - -
Seca3g01630 270 Gene3D - 191 264 - -
Seca3g01630 270 Pfam Alcohol dehydrogenase GroES-like domain 43 172 IPR013154 -
Seca3g01630 270 SUPERFAMILY GroES-like 11 202 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01630 Seca-Chr3 28166952 28173307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01630 43 186 Monolignol Biosynthesis Gene Families AT4G37970 29.655 7.62e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01630 K00121 - cave:132189734 396.741