Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01599 ATGACTGCAAATGTTTTAGTAACCAAAATGGCAGGAGATTCACTCACCTTAATTGGGGCCTGGGGCAGTCCATTCGCCCTGAGGGTGAAGTGGGCACTTGAACTAAAAGGGATTCAGTACCAATATGTGGAAGAAGATCTTCACAATAAGAGTGCCATGCTCCTGCAGTATAACCCTGTCTACAAGAAGGTTCCAGTTCTTGTGCATCAGGGTAAGCCCCTCGCAGAATCTCTAGTCATTCTTGAGTATATTGATGAGACCTGGAAGCAAAATCCTCTTCTTCCACATGATCCCTATGAAAGGGCCAAGGCACGGTTCTGGTCCAGATTCACTGATGAAAAGTTTATGCCAGCACTTATGGCAACCTTTTCCAAAGGAGCAGGGGAGGAACAAGAAAAGGCAGCACAAGAAGTTAGAGAGATTCTGAAGACTCTTGAAAGTGGACTTGAGGGAAAGCGATACTTTGGAGGTGAAAAAATAGGCTTCGCTGATATTGCTATTGGGTGGCTTGGATTCTGGGTAAGAGTTTTGGAGGAAATTTTGGGCATAAACCTAATTGATACAGAGTCCATGGCTAAGCTTAATGCTTGGTTCGATGATTTTCTTGAGCTTCCTGTTATCAAAGAATGCATGCCGCCTCGTGATAAACTGCTTGAGCTCAACACGGCCTTCCACAAGTTCTTGACATCTTCATCCACTTAA 702 0.4444 MTANVLVTKMAGDSLTLIGAWGSPFALRVKWALELKGIQYQYVEEDLHNKSAMLLQYNPVYKKVPVLVHQGKPLAESLVILEYIDETWKQNPLLPHDPYERAKARFWSRFTDEKFMPALMATFSKGAGEEQEKAAQEVREILKTLESGLEGKRYFGGEKIGFADIAIGWLGFWVRVLEEILGINLIDTESMAKLNAWFDDFLELPVIKECMPPRDKLLELNTAFHKFLTSSST. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01599 233 SUPERFAMILY Thioredoxin-like 14 116 IPR036249 -
Seca3g01599 233 FunFam Tau class glutathione S-transferase 94 231 - -
Seca3g01599 233 SFLD Main.3: Omega- and Tau-like 12 230 IPR045073 -
Seca3g01599 233 FunFam Tau class glutathione S-transferase 10 96 - -
Seca3g01599 233 SUPERFAMILY GST C-terminal domain-like 86 226 IPR036282 -
Seca3g01599 233 Pfam Glutathione S-transferase, C-terminal domain 122 205 IPR004046 -
Seca3g01599 233 Pfam Glutathione S-transferase, N-terminal domain 14 86 IPR004045 -
Seca3g01599 233 Gene3D Glutaredoxin 9 93 - -
Seca3g01599 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 13 92 IPR004045 -
Seca3g01599 233 CDD GST_C_Tau 98 224 IPR045074 GO:0004364|GO:0006749
Seca3g01599 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 97 224 IPR010987 -
Seca3g01599 233 CDD GST_N_Tau 15 88 - -
Seca3g01599 233 Gene3D - 94 232 - -
Seca3g01599 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 18 219 IPR045073 -
Seca3g01599 233 SFLD Main (cytGST) 12 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01599 Seca-Chr3 27628041 27629335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01599 12 219 Glutathione S-transferase Gene Family AT2G29420 46.635 1.06e-71 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01599 K00799 - gmx:100813267 368.237