Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01591 ATGACAAAAATTATTAAAGAGATGTTACCTCCAGATGTACGTGTTGCAAGAGATGCACAAGATCTATTGATTGAGTGCCAAGCTTTTGCCCTGGATTATAATTAA 105 0.3524 MTKIIKEMLPPDVRVARDAQDLLIECQAFALDYN. 35
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01591 34 Gene3D Histone, subunit A 1 33 IPR009072 GO:0046982
Seca3g01591 34 PANTHER PROTEIN DR1 HOMOLOG 1 27 IPR044255 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01591 Seca-Chr3 27498222 27498326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01591 1 26 CCAAT-DR1 Transcription Factor Family AT5G23090 100.000 6.46e-13 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01591 K21751 - bvg:104886728 55.0694