Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01556 ATGAATGCCAGTAACAAAGTCGAAGCAGAGCGATTGCTTGATATGGGCGAGAAAATGCTGCAGAGCCACGATCTGAAAACTTCTAGGCAGTTGGCCATTTTGGCCCAGGAAGTCGAACCTCTTCTCGAAGGTTCGGACCAACTCCTCGCCATCTTGGACGTTCTTGACGCAGCAGAGAAATGCGTCAACAACAATACCCTTGACTGGTACGCTATTCTCCAGGTGGGCCGAGGCACTAATGACCTCGATCTCATTAAGAAACAGTATCGTAGGCTCGCCATTATCCTCCAGCCTAATAGGAACTTATTCTCCTTCGCCCATGAGGCCCTCAAGCTTGTTTCGGAAGCCTGGGCCGTGTTATCTGACACGGCCCAAAAGTCCATCTACGACAAGGCTTTCGAACGAACCAGTGGTGAATCTGGTGATGGCAAGTCTACCTTCTGGACTGCGTGCCCCTATTGTTACCGGTTGTATGAGTATCTTCGAGTTTACGAGGATTGCTGTTTGAAGTGCCAGAATTGTGAGAGATCGTTTCATGGGCTTTCGATTCCTGTTCTGCCGAAAATGGTACCGGGGAAAGAAGCTTATTATTGTACCTGGGGATTCCCTCCGACGGGTTCTGTGTCCCAAAAGTTAGAGAGTAGTGTGAATGCTGGACAACGGAAACCAATGCCAATGCCAACGGAAACCAATAGTCCCAAAAGTAATGAGGTTGCATCTGCTCCGAGGAAGCGAGGAAGGCCACGGAAGGTGGCTTGA 759 0.4967 MNASNKVEAERLLDMGEKMLQSHDLKTSRQLAILAQEVEPLLEGSDQLLAILDVLDAAEKCVNNNTLDWYAILQVGRGTNDLDLIKKQYRRLAIILQPNRNLFSFAHEALKLVSEAWAVLSDTAQKSIYDKAFERTSGESGDGKSTFWTACPYCYRLYEYLRVYEDCCLKCQNCERSFHGLSIPVLPKMVPGKEAYYCTWGFPPTGSVSQKLESSVNAGQRKPMPMPTETNSPKSNEVASAPRKRGRPRKVA. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01556 252 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Seca3g01556 252 Pfam DnaJ domain 68 130 IPR001623 -
Seca3g01556 252 CDD DnaJ 68 122 IPR001623 -
Seca3g01556 252 MobiDBLite consensus disorder prediction 209 252 - -
Seca3g01556 252 MobiDBLite consensus disorder prediction 224 238 - -
Seca3g01556 252 Gene3D DnaJ domain 55 148 IPR036869 -
Seca3g01556 252 SMART dnaj_3 67 125 IPR001623 -
Seca3g01556 252 SUPERFAMILY Chaperone J-domain 63 132 IPR036869 -
Seca3g01556 252 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01556 Seca-Chr3 26817023 26817781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01556 2 211 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 50.000 4.27e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01556 - - gmx:100802055 285.804