Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01529 ATGGCACCCAGTTTTGATTGTGTTTCAAGCCTCCTTTGTGCTGAGGATAGCAGTGTTTTTGATGATGGGGATGTGTACGAGGAAACGGGGCGTTCTAGGTACCATCAGAGGAGTGAGGAGCAGTTTGGTGACCCAGATGGGTTGCCATTGCAGAGTGAAGAGTGTTTGGCGATGATGATGGAAAAGGAATGTCAACACTTGCCTTGTGCTGATTACTTCAATAGGCTACAGAGTGGGGATTTGGACTTTGGGGCCAGAAAGGAAGCCATTGATTGGATTGAAAAGGTTCGAGCGCATTTCGGTTTTGGTCCTCTCTCTGCATATCTATCCATAAATTACTTGGATCGGTTCCTTTCTGCATATGAATTACCAAAGGGAAGAGCTTGGACAATGCAACTATTGGCTGTGGCATGCTTATCTCTTGCAGCCAAAATAGAGGAAACTGAAGTTCCTCTGTGTCTTGATTTGCAGGTGGGTGAATCCAAGTTTGTATTTGAGGCTAAAACCATACAGAGAATGGAGCTTCTGGTACTGAGCACATTGAGGTGGAGAATGCAAGCAATTACTCCATTCTCCTTCATTGATTATTTCCTTTCCAAGATCAATGATGATCAAAGTTCATTTAGATCTTCAATTTTGAGATCCACCCAACTTATATTAAGCACCTTAAAAGGGATTGACTTCTTGGAATTCAAACCATCAGAGATTGCAGCAGCAGTGGCTACATATGTTGTGGGGGAAACCGAAACAATTGACACTGCCAAAACAATTTCAGTTCTGATTCAACATGTAGAAAAGGTAAAGATGGTGGTCCAATAA 819 0.4261 MAPSFDCVSSLLCAEDSSVFDDGDVYEETGRSRYHQRSEEQFGDPDGLPLQSEECLAMMMEKECQHLPCADYFNRLQSGDLDFGARKEAIDWIEKVRAHFGFGPLSAYLSINYLDRFLSAYELPKGRAWTMQLLAVACLSLAAKIEETEVPLCLDLQVGESKFVFEAKTIQRMELLVLSTLRWRMQAITPFSFIDYFLSKINDDQSSFRSSILRSTQLILSTLKGIDFLEFKPSEIAAAVATYVVGETETIDTAKTISVLIQHVEKVKMVVQ. 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01529 272 FunFam D6-type cyclin 183 272 - -
Seca3g01529 272 SMART cyclin_7 91 179 IPR013763 -
Seca3g01529 272 FunFam D2/4-type cyclin 69 182 - -
Seca3g01529 272 CDD CYCLIN_AtCycD-like_rpt1 85 183 - -
Seca3g01529 272 CDD CYCLIN_AtCycD-like_rpt2 188 269 - -
Seca3g01529 272 Gene3D - 56 251 - -
Seca3g01529 272 ProSitePatterns Cyclins signature. 86 117 IPR006671 -
Seca3g01529 272 Gene3D - 69 186 - -
Seca3g01529 272 PANTHER CYCLINS 52 244 IPR039361 -
Seca3g01529 272 SUPERFAMILY Cyclin-like 44 185 IPR036915 -
Seca3g01529 272 Pfam Cyclin, N-terminal domain 55 185 IPR006671 -
Seca3g01529 272 Pfam Cyclin, C-terminal domain 188 247 IPR004367 -
Seca3g01529 272 SUPERFAMILY Cyclin-like 170 245 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01529 Seca-Chr3 26315983 26318759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01529 10 268 Core Cell Cycle Gene Families AT5G65420 53.817 5.64e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01529 K18810 - gmx:547739 390.963