Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01508 ATGGAATCCTCTATGCAATTAGCCATTATTGCCATTTTGGCATCTTCGTTATTCCTCTGGCATGCTTTTTTGCGAAAGAGGAGAACTAATGGAAGTGGCATTAGCAAGAGTAAAGATGCTCCTGTCCCAGCTGGTGCATGGCCAGTTATTGGTCACCTTCACCTTTTAGGTGGTGATGATCAACTTCTCTATCGAACACTCGGAGCAATGGCTGATAAATATGGACCAGCATTTAACATATGGCTTGGTACTCGCCGAGCATTTGTGGTTAGTAGCTGGGAAGTGGCAAAAGAATGCTTCACAACTAATGACAAGGCACTTGCCTCACGTCCCAAAACAGTTGCAACAAAGCATATGGGATACAACTATGCCGTGTTTGGTTTTGCTCCTTATAGTCCCTTTTGGCGTGAAATGAGAAAGATTGCTACCCTTGAACTTCTTTCCAATCGTAGGCTTGAAATGCTTAAACATGTCAGAGTTTCTGAACTCAACATGGGTATAAGGGACCTATACAATTCTTGGGTCCAAAATGGTTCAAAGCCTGTGATGGTAGAACTCAATAGATGGTTAGAGGATTTGACACTGAATATGGTGGTTAGAATGGTTGCAGGGAAACGTTACTTTGGTGCCTCAGCTAGTTGTGATGATGATGAGGCAAGGCGGTGCCAGAAGGCAATTAATCAATTCTTTCATCTAATTGGTATTTTTGTGGTTTCAGATGCGCTCCCATTTTTGGGTTGGTTCGATTTTCAGGGGCATGAGAGGACAATGAAAAAAACAGCCAAGGAGTTAGATGCTATACTTGAAGGATGGCTACAAGAGCATCGCAAACAGAGAGTTGATGGTGAAGTTAAAGCAGAGGGTGAACAGGATTTCATTGATGTGATGTTGTCACTTGAGGAGGAAGGTCACTTATCAAATTTCCTCTGTGACTCGGATACAAGCATCAAATCCACATGCCTGGCTCTTATACTTGGTGGTAGTGATACCGCGGCAGGAACACTTACTTGGGCAATCTCTTTACTCCTCAACAATCGTCTAACATTAAAAAAGGCACAAGAAGAGTTGGACATGAATATTGGCATGGAACGACAAGTTGAGGAGTCAGATATTAGAAATCTTGTGTATATTCAAGCTATTATCAAGGAAACCCTACGGCTCTACCCAGCTGGTCCTCTACTAGGACCAAGGGAAGCTCAAGAAGATTGTAATGTTGCTGGTTATCATGTCCCTGCTGGCACACGATTGGTGGTTAACTTATGGAAGATTCAAAGGGATCCAAGGATCTGGGAAGATCCTTCTGTTTTCAGACCTGAGAGATTTCTCACAAGCCATCACGAAGTTGATATTAGAGGCCAAAACTTTGAACTCTTTCCATTTGGTTCTGGTAGACGGTCTTGTCCTGGCATGTCATTTGCACTCCTAGTGCTTCACTTGACACTTGCCCATCTACTTCATGCATTTGAATTCGCAACCCCATCAAATGAACCTGTTGACATGACTGAAAGCCCTGGTTTAACTATTCCTAAGGCAACCCCATTAAAGGCTCTACTTACTCCACGCCTTCCAACCCAATTATATGCCTAG 1587 0.4316 MESSMQLAIIAILASSLFLWHAFLRKRRTNGSGISKSKDAPVPAGAWPVIGHLHLLGGDDQLLYRTLGAMADKYGPAFNIWLGTRRAFVVSSWEVAKECFTTNDKALASRPKTVATKHMGYNYAVFGFAPYSPFWREMRKIATLELLSNRRLEMLKHVRVSELNMGIRDLYNSWVQNGSKPVMVELNRWLEDLTLNMVVRMVAGKRYFGASASCDDDEARRCQKAINQFFHLIGIFVVSDALPFLGWFDFQGHERTMKKTAKELDAILEGWLQEHRKQRVDGEVKAEGEQDFIDVMLSLEEEGHLSNFLCDSDTSIKSTCLALILGGSDTAAGTLTWAISLLLNNRLTLKKAQEELDMNIGMERQVEESDIRNLVYIQAIIKETLRLYPAGPLLGPREAQEDCNVAGYHVPAGTRLVVNLWKIQRDPRIWEDPSVFRPERFLTSHHEVDIRGQNFELFPFGSGRRSCPGMSFALLVLHLTLAHLLHAFEFATPSNEPVDMTESPGLTIPKATPLKALLTPRLPTQLYA. 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01508 528 Gene3D Cytochrome P450 33 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 FunFam Cytochrome P450 82C4 31 519 - -
Seca3g01508 528 CDD CYP82 75 521 - -
Seca3g01508 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Seca3g01508 528 PANTHER CYTOCHROME P450 82C3-RELATED 23 527 - -
Seca3g01508 528 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 SUPERFAMILY Cytochrome P450 43 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01508 528 Pfam Cytochrome P450 43 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01508 Seca-Chr3 25965661 25967847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01508 40 528 Cytochrome P450 AT4G31940 69.028 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01508 K23136 - gmx:100811993 903.279