Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01490 ATGGATACTACTTGCAATCGAGTTTTGGCACAAGGAGTACTTATTTTCCTTGTGATTGCATCACTGGCTGCAGGGAGCGAGGGCAGAAGCATCTTTGTTGGAGACTCTGAAGGTTGGCGTGCAGGCACTAACTACACCGAATGGGCTATCAAAAATAGCCCCTTCCACATAAATGATACACTGGTGTTCAAGTATCCCCCACCAGGCAATTCGACGCTTGCTCAAAGTGTGTATTTACTTCCAAACCTGTGGAGCTACACAACGTGCGAATTCAGGGGTGCAAAGCTATTGGGAAGTACAGCTGAAGGGGCTGGTGAGGGCTTAAAGGTGGAGCTCAATCAGTTGAAGCCTTACTACTTTGCCTCTGCAGAAGGCAATGCCTATGACTGCATTGCTGGCCTCAACAAGTTCATTGCTGTCCCATCTACACGTTCCTTTTAG 441 0.4785 MDTTCNRVLAQGVLIFLVIASLAAGSEGRSIFVGDSEGWRAGTNYTEWAIKNSPFHINDTLVFKYPPPGNSTLAQSVYLLPNLWSYTTCEFRGAKLLGSTAEGAGEGLKVELNQLKPYYFASAEGNAYDCIAGLNKFIAVPSTRSF. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01490 146 Gene3D - 27 142 IPR008972 -
Seca3g01490 146 SUPERFAMILY Cupredoxins 29 140 IPR008972 -
Seca3g01490 146 ProSiteProfiles Phytocyanin domain profile. 29 142 IPR003245 GO:0009055
Seca3g01490 146 PANTHER GLYCINE-RICH PROTEIN-LIKE 27 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01490 Seca-Chr3 25677250 25678057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01490 26 143 Phytocyanin Superfamily AT4G32490 31.667 3.25e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01490 - - vra:106760467 228.024