Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01472 ATGGAACCAACCAATCCAGAAATCTCTGTTGAGGTTCCTCCATACCTTCGAGTACACAAGGATGGGACTATTGAGAGACTAGCCGGTACCCAAGTTGTTCCTGCGGGCTTTGATTCCGAAACCAACGTAGTTTCCAAAGACATCCTCATCATACCAGAAACTGGTGTCACAGCCAGGCTATATTGTCCCAATTTCACCCACAAAAATGTGAAGCTTCCTTTAGTTCTCTACTTCCATGGTGGGGCCTATTGCATCTCTTCTCCCTCCGATCCCCTCTACCATAACTCCCTCAACAAACTCGTAGCTGAGGCTAATGTTGTTGCTGTCTCCGTTAATTATCGGTTAGCACCAGAACATCCACTTCCAGCTGCATACCAAGATTCTTGGGCTGCTGTTCAATGGGTTGCCTCTCATGCTGCCCCAGATGGTGAAGGGCATGAAAACTGGCTCATGGACAAAGTTGACTTTAGCAGGGTGTTCTTAGTAGGTGATAGCGCAGGTGCCAACATTGGACACTACATGGCTGTGAGGTTGCATGTTCTGAGCTCTGGTCAGTTCAAGGTCCCGGGTCTTATCATGGTCCATCCTTATTTCTGGGGGAAGGAACCAATTGGTGTGGAGATCACTGATCCAGAGAGGAAGAAAATGGTGGACAAGTGGTGGGATTTTGTTTGTCCTTCTGATAAAGGGAATGATGATCCCCTAATTAACCCGTTTGTGGAGGAAGCTCCAGATCTTAAAGGTGTGGGTTGCAACAAGGTGCTTGTTACTATTGCTGAGAAAGACATACTGAGGGATAGAGGGAAGCTTTATCATAAAAAATTGGTGAATAGTGGTTGGAAGGGAACGGCTGAGTTTTATGAGACTCAAGGGGAGGATCATGTCTTTCACATCTTCAACCCAAATTCTGACAACGCCAAGAGCTTGATTAAACGCATAGCTGCTTTCATCAATGAACAGTGA 963 0.4621 MEPTNPEISVEVPPYLRVHKDGTIERLAGTQVVPAGFDSETNVVSKDILIIPETGVTARLYCPNFTHKNVKLPLVLYFHGGAYCISSPSDPLYHNSLNKLVAEANVVAVSVNYRLAPEHPLPAAYQDSWAAVQWVASHAAPDGEGHENWLMDKVDFSRVFLVGDSAGANIGHYMAVRLHVLSSGQFKVPGLIMVHPYFWGKEPIGVEITDPERKKMVDKWWDFVCPSDKGNDDPLINPFVEEAPDLKGVGCNKVLVTIAEKDILRDRGKLYHKKLVNSGWKGTAEFYETQGEDHVFHIFNPNSDNAKSLIKRIAAFINEQ. 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01472 320 Gene3D alpha/beta hydrolase 8 319 IPR029058 -
Seca3g01472 320 PANTHER ARYLACETAMIDE DEACETYLASE 12 304 - -
Seca3g01472 320 Pfam alpha/beta hydrolase fold 75 297 IPR013094 GO:0016787
Seca3g01472 320 SUPERFAMILY alpha/beta-Hydrolases 20 319 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01472 Seca-Chr3 25380907 25381869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01472 5 317 Carbohydrate Esterase AT3G48700 44.479 1.53e-91 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01472 - - var:108341277 516.153