Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01465 ATGGTGCCAATAACACATGGTCATCATGTGGTCGAGCATCGTGGAATTGTAGGTGGTTCTGATGATTCGGACTTTGATTCAGTTGTGATACAGAGAGAGCAAATGGATCACACAGAATTTTGGTATTTTGGAATCTTTGATGCTCTAATTGGAGATGGAGTTACCAAGTATATGCAATCCCATTTTTTTGACAAGAAGCTCAAAGAGGGATTGGTAGTGTTCCCAAAGCCATGGAAGGAGAGCAGGTGGCAGCTGGATGGCCCTCATGGCTGGCAGCAGTGGCTGGAGAGGCTATCAAGGGATGGCTGCCACGGCGTGCGGATTCTTTTGAGAAGTTGGATAAAGTACGGGGAGTTACAGGGTCTTAATAAGCAGGAGATTGCAGAAAGATATGGGAAAGAGAAAGTGCATGAGTGGCAACGAAGTTATGATATTCCACCTTCCAAGGGCGAGAGCTTCGAAATGTGTTCAGAGAGAGTTGTTGCCTATTTTAAAGATTCTATTAAACCCCAACTACAATCAGGAAAGCACATGATGGTTGCTGCTCATGGGAACTCATTGAGGACCATGCTTGATCTTTACTCCTCTATTGACAAACAGGTCATTAATTTAGAATTATCAACTGGGATACCATTGCTTTACATATATAAAGAGGGGAAGTTTATTAGTAGGGGAAGTCCTGTTGGACCTACAGAAGCTGGTGTTTATGCATATACTCAGGTATAA 726 0.4311 MVPITHGHHVVEHRGIVGGSDDSDFDSVVIQREQMDHTEFWYFGIFDALIGDGVTKYMQSHFFDKKLKEGLVVFPKPWKESRWQLDGPHGWQQWLERLSRDGCHGVRILLRSWIKYGELQGLNKQEIAERYGKEKVHEWQRSYDIPPSKGESFEMCSERVVAYFKDSIKPQLQSGKHMMVAAHGNSLRTMLDLYSSIDKQVINLELSTGIPLLYIYKEGKFISRGSPVGPTEAGVYAYTQV. 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01465 241 Pfam Histidine phosphatase superfamily (branch 1) 114 199 IPR013078 -
Seca3g01465 241 PANTHER PHOSPHOGLYCERATE MUTASE 115 240 IPR005952 GO:0006096|GO:0016868
Seca3g01465 241 Gene3D - 106 228 IPR029033 -
Seca3g01465 241 SUPERFAMILY Phosphoglycerate mutase-like 115 220 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01465 Seca-Chr3 25297212 25299734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01465 1 65 PP2C-type Phosphatase Gene Family AT3G23360 42.424 1.35e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01465 K01834 - gmx:100804183 200.29