Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01453 ATGGCTACAGCAATAGGAAGAAGCTTTTCTTTCCAGCCACACTCTCTATTCAACAGTAAGACCATGGACAAACCCTCTCCAGCAGGAGGATACTTGTGGTTTGGGTCTGCTACTTCAGGAGCAGGAGTCACCCCACGTTGTAGGCGAATTTGTGTAGCAGCACAACAGCGACCTACATGGCTTCCAGGACTTGATCCCCCACCTTATCTTGATGGAACTCTGGCTGGAGATTTTGGGTTCGACCCACTTGGGCTTGGAGAGGATCCTGAAAGCTTAAGGTGGTATGTGCAGGCAGAGCTAGTTCATGCTCGCTTTGCAATGCTTGGGATCTTCGGAATTCTAGTGACAGATCTACTTCGCGTTACAGGAGCTAGTAAGATACCAGTGTGGTTTGAAGCTGGTGCCATAAAATATGAGTTTGCTAATACAGAGACGCTCTTCATCGTTCAACTTCTTTTGATGGGGTTTGCTGAAACAAAAAGGTACATGGATTTCATTAGTCCAGGATCTCAAGCTAAAGAGGGGTCCTTCTTTGGATTGGAAGCTGCACTAGAAGGCTTAGAGCCAGGGTATTTCTATTTTACCATAACAAAATATATACATATTTTGAATCTGATTCTTTGTGTTCTTTTTTTATTTAACTATTTTATTGAGTACTCCAACCGAGACTCCTGCATCCTATCCTCCTCACCAACAGAAAAAGCTGTCATAGGGCATTACTGTACTTGCATTAGTAGACATTGA 744 0.4368 MATAIGRSFSFQPHSLFNSKTMDKPSPAGGYLWFGSATSGAGVTPRCRRICVAAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMLGIFGILVTDLLRVTGASKIPVWFEAGAIKYEFANTETLFIVQLLLMGFAETKRYMDFISPGSQAKEGSFFGLEAALEGLEPGYFYFTITKYIHILNLILCVLFLFNYFIEYSNRDSCILSSSPTEKAVIGHYCTCISRH. 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01453 247 Gene3D Chlorophyll a/b binding protein domain 67 200 - -
Seca3g01453 247 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 53 175 IPR001344 GO:0009765|GO:0016020
Seca3g01453 247 SUPERFAMILY Chlorophyll a-b binding protein 51 193 - -
Seca3g01453 247 Pfam Chlorophyll A-B binding protein 66 196 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01453 Seca-Chr3 25132889 25134619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01453 49 191 Chloroplast and Mitochondria Gene Families AT3G61470 48.252 2.67e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01453 K08911 - gmx:100804934 308.916