Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01433 ATGCACTACATCCAGAAGGGACTCCTATTCAAAAAGCCCTCACCGCTTGTTAACCAACAAGATTTCATCGATAATCTGTTGGAAAAGTTAAAGCACTCTCTTTCTCTCGCCCTCGTCCATTTCTATCCATTAACTGGCCGCCTTGTTACCCACAAAACCCAAAACCCACCCTCTTATTCTATTTTCGTTGATTGTTGCAGTGACAATAATCCAGGAGCTAGATTCATCTATGCAACTTTGGACATCACCATATCCGACATTCTCAACTCCATTGAGGTCCCACCTATTGTTCAGTCATTTTTTGACCACCACAAAGCAGTCAACCATGATGGTCACACAATGCCTTTATTGTCCATCCAGGTCACTGAACTTGTTGATGGAGTTTTTATTGGCTATTCCATGAACCACTGTATTGCTGATGGAACTTCCTTTTGGAATTTCTTTAATACATGGTCTCACATCTTTCAAGCTCAAGCTCAAGGTCAAAGGCAAGGGCATGATCATGATCATGATCATGATGATGTTCCTATTTTGCATCCACCCATTCACAATCGATGGTTTCCAGAAGGTTGCGGTCCACTAATCAATCTTCCATTTAAACATCATGACGAGTTTATTAACAGATCTGAACCAAAACACCTCAGAGAGAGGATCTTCCACTTTTCAGCAGAGTCCATTGCGAAACTGAAAGCAAAGGCGAACTTACAATCAAATAGCACCAAAATCTCTTCATTCCAATCCTTATCAGCACATGTTTGGAGATCCATAACACGCGCGCGCCGCCTAACACAAGATCAGAAAACCAGTTGCAGATTAGCCATAAACAATCGATCAAGAATGGAACCGCCTCTACCGCAAGAGTACTTTGGAAATTCAATTGGTATGGTGAGTGCAGAGGCGAAGGCAGGGGAATTGTTTGAGAATGATCTGGGATGGGCAGCATGGAAGGTTCACCTTGCTGTTGCAAACCATAATGATAAAGTGGTGCGTCAATTGCTCAAAGAATGGTTGCAATATCCTGTTATTAACCAACTTAGTGGTCTCCACTTTGATCCCTGCAGTGTGAGGATGTCAAGTTCACCAAGGTTCAACATGTATGGGAATGAATTTGGAATGGGGAAAGCTGTGGCTGTTAGAAGTGGTTATGCAAACAAAGTGGATGGGAGCGTGACATCATTCCCAGGATATGAAGGAGGGGGAAGCATTGATTTGGCAGTGTCCCTTTCGCCTGATGCAATGGGAGCGCTGGAATCAGACGACGAGTTCATGGAAACAGTTTCTGTGGCCATTCCCTTTTACTAG 1302 0.4339 MHYIQKGLLFKKPSPLVNQQDFIDNLLEKLKHSLSLALVHFYPLTGRLVTHKTQNPPSYSIFVDCCSDNNPGARFIYATLDITISDILNSIEVPPIVQSFFDHHKAVNHDGHTMPLLSIQVTELVDGVFIGYSMNHCIADGTSFWNFFNTWSHIFQAQAQGQRQGHDHDHDHDDVPILHPPIHNRWFPEGCGPLINLPFKHHDEFINRSEPKHLRERIFHFSAESIAKLKAKANLQSNSTKISSFQSLSAHVWRSITRARRLTQDQKTSCRLAINNRSRMEPPLPQEYFGNSIGMVSAEAKAGELFENDLGWAAWKVHLAVANHNDKVVRQLLKEWLQYPVINQLSGLHFDPCSVRMSSSPRFNMYGNEFGMGKAVAVRSGYANKVDGSVTSFPGYEGGGSIDLAVSLSPDAMGALESDDEFMETVSVAIPFY. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01433 433 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 424 - -
Seca3g01433 433 FunFam Tryptamine hydroxycinnamoyl transferase 200 419 - -
Seca3g01433 433 Gene3D - 1 193 IPR023213 -
Seca3g01433 433 Gene3D - 200 418 IPR023213 -
Seca3g01433 433 Pfam Transferase family 2 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01433 Seca-Chr3 24824432 24825733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01433 28 417 Monolignol Biosynthesis Gene Families AT5G48930 30.244 2.05e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01433 - - gmx:100788297 634.409