Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01431 ATGAGTTCCCCTGCCGTTCTTCGCGTTTCAGAATGCTTCATCAAGCCGCAGCACCCCACCCAAGAAGATGCAAACCAACATTACTATTTAGCCCCTTCAGATATTGCTATGTTGAATGCCAACTACATCCAGAAAGGCCTTCTCTTCAAGAAGCCTGTTATTGTTAATCAACAAGATTTCATCAATAACCTCTTGTATAACCTCAAACACTCTCTTTCTCTCGCCCTCGTCCATTTCTATCCATTAACTGGTCGCCTTGTCACCAAAATATCCCAAGATCCTCCCTCTTATTATGTTTTCGTAGATTGCAGTGACAGTCCTGGAGCCAGATTCATCTATGCAACATTAGATATGACCATATCTGACATCCTCTCCCCCATTGACGTCCCACCTATTGTTCAATCATTTTTTGACCATGACAGAGCAGTCAACCATGACGGCCATACCATGCCTTTATTGTCCATCCAAATTCCCATACCGCACCAACCCATTCACAATCGCTGGTTTCCAGAGGGTTGCGGTCCACTAATCAATCTTCCCTTCAAACATCATGATGAGTTTGTTAGCAGATATGAAACACCAAAACTGAGAGAGAGGGTCTTCCACTTTTCAGCAGAGTCAATTGCGAAACTTAAAGCAAAGGCCAACTTGGAGTCTAATACAACCAAAATCTCTTCATTCCAGTCACTTTCAGCACTCGTTTGGAGATCCATAACTCGTGCACGCCGCTTACCAGATGATCAGAGAACCAGTTGCAAGCTGGCCACAAACAATCGATCAAGAATGGAACCGCCTCTGCCTCAGGAATATTTTGGAAACTCAATTTATGTAGTTAGTTCAGAGGCAACGGCAGGGGAATTGCTTGAAAACAATCTTGGATGGGCAGCATGGAAGTTACATCTGGCTGTTGCAAATCATAACGACAGAGTAGTGCGACAGTGGCATAAAGAGTGGTTAGAGTCTCCTTTCATCTATCAACCGGCTCGGTTCTTTGACCCGTATACTGTGATGATGGGTAGTTCACCAAGGTTCAACATGTATGGAAATGAATTTGGAATGGGAAAAGCGGTGGCGGTTAGAAGTGGGTATGCTAACAAATTTGATGGAAAAGTGACATCATATCCCGGTCATGAAGGAGGGGGAAGCATTGATTTGGAAATGTGTCTTTCGGCGGATACAATGAGTGCGCTGGAATCAGACGAGGAATTCATGAATTCGGTTTCAGAGTCCAATCCCCTCTACTAG 1245 0.4426 MSSPAVLRVSECFIKPQHPTQEDANQHYYLAPSDIAMLNANYIQKGLLFKKPVIVNQQDFINNLLYNLKHSLSLALVHFYPLTGRLVTKISQDPPSYYVFVDCSDSPGARFIYATLDMTISDILSPIDVPPIVQSFFDHDRAVNHDGHTMPLLSIQIPIPHQPIHNRWFPEGCGPLINLPFKHHDEFVSRYETPKLRERVFHFSAESIAKLKAKANLESNTTKISSFQSLSALVWRSITRARRLPDDQRTSCKLATNNRSRMEPPLPQEYFGNSIYVVSSEATAGELLENNLGWAAWKLHLAVANHNDRVVRQWHKEWLESPFIYQPARFFDPYTVMMGSSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVTSYPGHEGGGSIDLEMCLSADTMSALESDEEFMNSVSESNPLY. 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01431 414 FunFam Tryptamine hydroxycinnamoyl transferase 182 400 - -
Seca3g01431 414 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 160 405 - -
Seca3g01431 414 Pfam Transferase family 196 404 - -
Seca3g01431 414 Pfam Transferase family 12 157 - -
Seca3g01431 414 Gene3D - 183 399 IPR023213 -
Seca3g01431 414 Gene3D - 9 161 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01431 Seca-Chr3 24625542 24626933 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01431 68 398 Monolignol Biosynthesis Gene Families AT5G48930 26.276 5.26e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01431 - - gmx:100787228 624.78