Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01402 ATGGAAGCAGGGGAAAATTGTTGCGTCAAGGTTGCGGTCCATGTACGGCCACTCATCGCCGACGAGAAGCTTCAAGGATGTAAAGATTGTGTCACCGTTGTTACCGGGAAGCCTCAGGTACAAATTGGCTCCCACTCCTTTACATTTGATCATGTTTATGGAAGCACTGGTTCTCCCTCCTGTAACATGTTTGAGGAATGTGTTGCTCCCCTTGTTGATGGTTTGTTCCAAGGATATAATGCTACTGTTCTTGCATATGGTCAGACAGGTTCTGGGAAAACATACACCATGGGGACTGGCTTCAAAGAAGGTTGTCAGACAGGAATAATACCCCAAGTTATGAATGTTTTGTTCAACAAAATTGAGTCCTTAAAGCACCAGATTGAATTTCAGTTGCATGTTTCCTTTATCGAGATTCTTAAAGAAGAAGTAAGAGACTTGCTGGATCCCTCCTCCATGAGCAAACCAGAAACTGCAAATGGGCACGCAGGAAAAATGACCTCTCCTGGGAAGCCACCAATACAAATTCGTGAGACATCAAATGGAGTCATAACCCTTGCAGGATCTACTGAAGTCAGTGTCACAACACTAAAAGAAATGGCTACTTGCCTGGAACAGGGATCATTGAGCAGAGCAACTGGGAGCACCAATATGAACAACCAATCCAGTCGATCTCATGCTATCTTCACCATCACATTAGAGCAAATGAGGAAGCTCAATACTCCCAATGAAAGCAGTTTAAATGATACTGTGAATGAAGAGTATCTTTGTGCGAAGTTGCACTTAGTAGATCTCGCTGGATCGGAACGAGCTAAAAGAACAGGGTCTGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGTCTTCTAGCACTTGGCAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGCGTTCATGTGCCATATAGGGATAGTAAACTCACTAGGCTTTTGCAGGATTCACTTGGAGGTAACAGCAGAACTGTCATGATAGCCTGCATAAGTCCTGCTGACATTAATGCTGAGGAAACCCTAAACACTTTGAAGTATGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTTATCAATAGAGACCCCATGTCCAATGAGATGCTAAAAATGCGACAACAACTGGAGTATTTGCAGGCAGAACTTTGTGCTCGTGCTGGTGGCTCTTCTGAGGAAGTTCAGGTTCTTAAGGAAAGGATTACTTGGCTTGAAGCTGCTAATGAAGATCTTTGCCGTGAACTTCATGAATACCGTAGTAGATGCTCTGTTGTAGAACAAAGTGAAAAGGATTCTTATGGTGGTGGCACTTGCATTGTTAAGACTGATGGGCTTAAGAGGAGCTTACCTATCATAGCAGCTGATTATCCAATGAGTGAAACAGCAGGGTGCCAATTGCTAATTTTAGCAGGTGATTCAAGGGAAATTGAAGAAGTAGCAAAAGAGTGGGAGCACACACTTCTGCAAAATAGTATGGATAGAGAGTTACATGAATTGAATAAACGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTATTTGGAGTATCCGATGCTGAAGTACTCAAGCAGCACTTCGGAAGGAAGATAATGGAGCTAGAGGATGAGAAGAGAACAGTGCAGCGAGAGAGAGATTGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCAAATTCTGATGGACAAACACAGAAATTAGAGGATATTCATGCCCAAAAATTAAAAGCACTTGAAGCACAGATTCTGGATCTAAAGAAGAAACAAGAGAGCCAGGTCCAGCTTTTAAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGACTGCAAGATGAAATACAATCTATAAAGGCCCAAAAGGTTCAATTGCAACAAAGGATAAAACAAGAGGCAGAACAGTTTCGGCAATGGAAGGCTTCTAGAGAGAAAGAGCTATTGCAATTAAGGAAGGAGGGAAGAAAAAATGAGTATGAAAAGCACAAGTTGCAAGCTTTAAATCAGCGCCAGAAAATGGTCCTTCAGAGAAAAACTGAAGAAGCCGCAATGGCAACCAAAAGGTTGAAGGAATTGTTAGAAGCTCGTAAAACATCCAGCCGAGACACTTTAGTTACAATGAATGGAAGTGGAACAAATGGGCAGGTAACAAAATTTCCTTCCTCTTCTTCGATTTGCTTTACTATCCTCTTGATCTTAAATAAGTTTTTGAGTTTCATCTTTAGAGCAATGAGAAATCCTTACAACGGTGGCTTGATCACGAACTAG 2280 0.4184 MEAGENCCVKVAVHVRPLIADEKLQGCKDCVTVVTGKPQVQIGSHSFTFDHVYGSTGSPSCNMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKEGCQTGIIPQVMNVLFNKIESLKHQIEFQLHVSFIEILKEEVRDLLDPSSMSKPETANGHAGKMTSPGKPPIQIRETSNGVITLAGSTEVSVTTLKEMATCLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNTPNESSLNDTVNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAELCARAGGSSEEVQVLKERITWLEAANEDLCRELHEYRSRCSVVEQSEKDSYGGGTCIVKTDGLKRSLPIIAADYPMSETAGCQLLILAGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGVSDAEVLKQHFGRKIMELEDEKRTVQRERDCLLAEVENLAANSDGQTQKLEDIHAQKLKALEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRKNEYEKHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKTSSRDTLVTMNGSGTNGQVTKFPSSSSICFTILLILNKFLSFIFRAMRNPYNGGLITN. 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01402 759 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g01402 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 393 IPR027417 -
Seca3g01402 759 MobiDBLite consensus disorder prediction 150 176 - -
Seca3g01402 759 Coils Coil 531 565 - -
Seca3g01402 759 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g01402 759 Coils Coil 498 518 - -
Seca3g01402 759 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g01402 759 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g01402 759 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g01402 759 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g01402 759 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca3g01402 759 Coils Coil 574 646 - -
Seca3g01402 759 FunFam kinesin-like protein KIN-4A isoform X1 2 391 - -
Seca3g01402 759 CDD KISc_KIF4 7 364 - -
Seca3g01402 759 Gene3D Kinesin motor domain 2 391 IPR036961 -
Seca3g01402 759 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 717 IPR027640 GO:0003777|GO:0007018
Seca3g01402 759 Coils Coil 679 699 - -
Seca3g01402 759 Pfam Kinesin motor domain 15 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01402 Seca-Chr3 23958070 23971853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01402 9 402 Calmodulin-binding Proteins AT5G65930 33.417 4.76e-56 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01402 - - gmx:100802585 1292.72