Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01393 ATGGAAAGTGGATTGCCTATGCTTAATTGTCTCTTGCAGCAGACTCTGAGAAGCATTTGCACCTCTCCAAATTCTTCCACTTCTTCTAAATGGGTATATGCTGTCTTCTGGAGGATATTACCTAGAAACTTTCCTCCACCAAGGTGGGAATTTGGAGGAACTGCTCTTGATCGCTCAAAGGGAAATAAGAGAAACTGGATCCTTGTATGGGAAGATGGATTCTGTGATTTTGACGAATGTGAACAAAGGAGGAGTGGATACTTGAACGGCAGGTTTGGAGCTGAAGTATTCTTCAAAATGTCTCATGAGGTTTATAATTATGGAGAGGGACTACTAGGAAAGGTGGCTGCAGATAATGGTCACAAATGGGTCTACAGTGACAATCACAATGAGTGTGAACCTAGCTATATTGCTTCATGGAATGCTTCGGTGGAACCACAACCAAAAGCGTGGGAGTTTCAGTTCAGTTCAGGTATTCAGGTTAGTAAATTCACTCAAACATGTTGTACACAGATAGAAGAAGAGCTAATAACAGAAGCTTTCATTCAAGTTAATTTCACTCACTCAGGCTAA 573 0.4119 MESGLPMLNCLLQQTLRSICTSPNSSTSSKWVYAVFWRILPRNFPPPRWEFGGTALDRSKGNKRNWILVWEDGFCDFDECEQRRSGYLNGRFGAEVFFKMSHEVYNYGEGLLGKVAADNGHKWVYSDNHNECEPSYIASWNASVEPQPKAWEFQFSSGIQVSKFTQTCCTQIEEELITEAFIQVNFTHSG. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01393 190 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 160 - -
Seca3g01393 190 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 81 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01393 Seca-Chr3 23856912 23858557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01393 13 161 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 28.188 2.83e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01393 - - lja:Lj1g3v1686740.1 317.775