Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01391 ATGATGAATGGAAGGAACAGGTTCCCCTTTACTCCATCACAATGGCAAGATCTTGAACATCAAGCTCTTATCTACAAGTACACGGCTTCAGGTATCTCTATTCCACCTGATCTTCTCTCCACTATTAGAAGAAGCTATTTGGATTCTCCTTTGTCTACTAGGCTTTTGCCTAACCAGCCACAACATTTTGGATGGAACTATCTTCAGATGGGTTTGGGAAGAAAAATAGACCCTGAGCCAGTTGGATGGAACTATCTTTAG 261 0.4176 MMNGRNRFPFTPSQWQDLEHQALIYKYTASGISIPPDLLSTIRRSYLDSPLSTRLLPNQPQHFGWNYLQMGLGRKIDPEPVGWNYL. 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01391 86 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Seca3g01391 86 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Seca3g01391 86 PANTHER GROWTH-REGULATING FACTOR 5 8 80 IPR031137 GO:0005634|GO:0006351|GO:0032502
Seca3g01391 86 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01391 Seca-Chr3 23842832 23845177 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01391 7 80 GRF Transcription Factor Family AT3G13960 62.162 6.42e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01391 - - vun:114162468 162.155