Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01376 ATGGAGCACAATGTATGTCAACCACTTGAAGTTAATGAGCATAAAGATATTTTTCTTGGCCAAGTTGTTTATAACAAAGATGAAGCTTATGCCTTGTACCAAGATCATGCATTCAAAATGGGTTTTAGTGTAAGAAGAGGGAGGGAGTTGTATTATGATATTGAGAAAAAGAACACTCGTTTGAAGGATTATTATTGCTCTAAACAAGGGTTTAAGAACAATGAACCTGTAGGTGAAGTGGCTTGTGAAAGAGCAGATTCAAGAACAGATTGCAAAGTTATGGTGAGATTTAATGTGAGTAAGGATGGAGTGTGGAAAATTACAAAGTTAGAACTGAATCATAACCATGACTTTGTGCCACAAGAGCAAAGACATTTGCTACGTTCTATGAGAAGCATATCAAATGCCAAAGGAGGCCTCATTAATTCCATGGTGAATGCAAGTATGAAAGTTACAAATATTTAG 465 0.357 MEHNVCQPLEVNEHKDIFLGQVVYNKDEAYALYQDHAFKMGFSVRRGRELYYDIEKKNTRLKDYYCSKQGFKNNEPVGEVACERADSRTDCKVMVRFNVSKDGVWKITKLELNHNHDFVPQEQRHLLRSMRSISNAKGGLINSMVNASMKVTNI. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01376 154 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 139 - -
Seca3g01376 154 Pfam FAR1 DNA-binding domain 32 120 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01376 Seca-Chr3 23612774 23613729 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g01376 FAR1 8.7e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01376 - - tpra:123905334 247.284