Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01361 ATGGAGACCCGTGCAGCAAAGAAGAGGGCAAACGCTGCCGCACCAGTGTTACTGGGCAATAGACAAGTCAAGAGGCAACGTGTTGTGTTGGGGGAACTTCCCAATCTCCCCAATCTCATCCTTCCCCAATCTCCCCAAAAGCAGAAACTTCGATGCAGGAAGTATCCCCAGGACAAGAAACCAGCTCCTGCTGGTGACACACTGGATTTGAAGTCAGAGAATCCAGTTGACCATGATTCCCAGATTGGAGAATCTTATGCTTCGGACATCTTCACCTATCTTCGCATAATGGAGATGGAGAAAAAGAGAAGGCCAATTGTTGATTACATGGAGAGGGTTCAGAGAGATACTGTTACTACTAGCATGAGAGGGATATTGGTGGATTGGTTAGTAGAGGTTGCAGAGGAGTACAAGCTTCTCTCTGATACTCTTCATCTCTCTGTTTCATACATTGACAGGTTCCTATCTGTGAACCTTGTCAATAAGTCCAGGCTTCAATTGCTGGGTGTTTCCTCCATGCTCATTGCATCTAAGTATGAAGAAATTAACCCACCCAATGTGGAACAGTTTTGTAACATTACTGATAACACATACACCAAGTCAGAGGTTGTAAAGATGGAAGCTGACATACTCAAGTCCCTAAAGTTTGAAATGGGCAACCCTACTGTAATCACCTTTCTAAGGAAATTTGCTGAGATTGCATCTGAGAATAAAAAAACACCAGATCTGCAGAATGAATTTCTGAGCAACTATCTTGCTGATCTAAGTTTGTTGGACTATGATTGTATAAGATTCTTGCCTTCTACTGTGGCTGCATCGGCTGTATTTCTTGCCAGATTTATTATTAGTCCTGAAGTGCATCCTTGGACTTCATCCTTGTATGAATGCTCGGGTTATAAATCTGCTGACTTGAAAGAATGTGTTCTCATCTTACATGACTTGTATTTGTCAAGAAGATCAGCATCCTTCCAAGCTGTTAGGGAGAAATACAAGCAGCACAAGGTGATTTTTTCACCTTTCTTTTGCTGA 1029 0.4247 METRAAKKRANAAAPVLLGNRQVKRQRVVLGELPNLPNLILPQSPQKQKLRCRKYPQDKKPAPAGDTLDLKSENPVDHDSQIGESYASDIFTYLRIMEMEKKRRPIVDYMERVQRDTVTTSMRGILVDWLVEVAEEYKLLSDTLHLSVSYIDRFLSVNLVNKSRLQLLGVSSMLIASKYEEINPPNVEQFCNITDNTYTKSEVVKMEADILKSLKFEMGNPTVITFLRKFAEIASENKKTPDLQNEFLSNYLADLSLLDYDCIRFLPSTVAASAVFLARFIISPEVHPWTSSLYECSGYKSADLKECVLILHDLYLSRRSASFQAVREKYKQHKVIFSPFFC. 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01361 342 Pfam Cyclin, C-terminal domain 221 335 IPR004367 -
Seca3g01361 342 SUPERFAMILY Cyclin-like 81 218 IPR036915 -
Seca3g01361 342 ProSitePatterns Cyclins signature. 123 154 IPR006671 -
Seca3g01361 342 MobiDBLite consensus disorder prediction 40 80 - -
Seca3g01361 342 SMART Cyclin_C_2 221 339 IPR004367 -
Seca3g01361 342 PANTHER CYCLINS 67 332 IPR039361 -
Seca3g01361 342 SUPERFAMILY Cyclin-like 221 335 IPR036915 -
Seca3g01361 342 SMART cyclin_7 225 313 IPR013763 -
Seca3g01361 342 SMART cyclin_7 128 212 IPR013763 -
Seca3g01361 342 MobiDBLite consensus disorder prediction 51 78 - -
Seca3g01361 342 FunFam G2/mitotic-specific cyclin 105 217 - -
Seca3g01361 342 Gene3D - 103 219 - -
Seca3g01361 342 FunFam Cyclin superfamily protein, putative 218 290 - -
Seca3g01361 342 Pfam Cyclin, N-terminal domain 89 218 IPR006671 -
Seca3g01361 342 CDD CYCLIN_AtCycA-like_rpt2 221 334 - -
Seca3g01361 342 Gene3D - 89 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01361 Seca-Chr3 23359323 23362085 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01361 3 334 Core Cell Cycle Gene Families AT5G43080 58.683 1.18e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01361 K06627 - gmx:100787417 453.366