Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01359 ATGCAGACTCGGGTTGTATTAGGGGAACTCCCTAATTCAACCAATGTTATTATTGGTAAACCCAAAACCCTGAATCTCAAATTGAAGAAAGCACCTGCAACCACAAAGACCAAGACTGATAAGGAATCCAGCAAAGGCATTGATCCAGAGTCAACAACTCATGATAGTGTTTTTGTTATTGATATCTATGACTATCTCCGTGGAATGGAGATGCGAAGACCAATTTCTAATTACATGGACAGAGTCCAGAAAGATATTACTAGTTACATGAGAGGAATATTAGTAAATTGGTTAGTAGAGGTTGCAGAGGAGTACAAGCTTCTCTCTGATACCCTTCATCTCTCCGTTTCCTACATTGACAGGTTCCTATCCGTTAACCCTGTCATTAAATCCAGGCTTCAATTGCTGGGTGTTTCTTCCATGCTAATTGCATCAAAGTATGAAGAAATTAATCCACCCCGTGTGGAACAGTTCTGCAACATTACTGATAACACATATGACAAGGCAGACGTTGTGAAAATGGAAGCTGACATACTCAAGTCCCTAAAATTTGAACTGGGGAGCCCTACTGTTAAGACTTTCTTAAGGCAAGATCACTTTTCATTAAAAATTAACTTTCAGGCTCCAAGTTTGCAGTTTGAGTTTCTGTGTTACTATCTTGCTGAACTAAGCTTGTTGGACTATCATTGTGTTAAGTTTTTGCCTTCTTTTGTGGCTGCAGCTGTAGTATTTCTTGCTAGATTTATTGTTTGGCCTGAAGTTAATCCTTGGACATCAGCACTCCTTGAGTGCACTGGGTATATATCACTTCAGCTGAGAGAATGTGTTTGCATCTTACATGATCTGTATATGGCAAGAAGGGGAGAATCTTTCCAAGCTACTCGGGAGAAATACAGTCAGCACAAGTTTAAACATGTGGCAAACCTGCCTTCGCCTCCACACTTACCAAGTGATCTCTTTGAATATTAA 969 0.3983 MQTRVVLGELPNSTNVIIGKPKTLNLKLKKAPATTKTKTDKESSKGIDPESTTHDSVFVIDIYDYLRGMEMRRPISNYMDRVQKDITSYMRGILVNWLVEVAEEYKLLSDTLHLSVSYIDRFLSVNPVIKSRLQLLGVSSMLIASKYEEINPPRVEQFCNITDNTYDKADVVKMEADILKSLKFELGSPTVKTFLRQDHFSLKINFQAPSLQFEFLCYYLAELSLLDYHCVKFLPSFVAAAVVFLARFIVWPEVNPWTSALLECTGYISLQLRECVCILHDLYMARRGESFQATREKYSQHKFKHVANLPSPPHLPSDLFEY. 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01359 322 Pfam Cyclin, N-terminal domain 61 186 IPR006671 -
Seca3g01359 322 Pfam Cyclin, C-terminal domain 189 311 IPR004367 -
Seca3g01359 322 Gene3D - 61 308 - -
Seca3g01359 322 MobiDBLite consensus disorder prediction 29 50 - -
Seca3g01359 322 MobiDBLite consensus disorder prediction 33 49 - -
Seca3g01359 322 SUPERFAMILY Cyclin-like 189 314 IPR036915 -
Seca3g01359 322 PIRSF Cyclin_A_B_D_E 15 320 IPR046965 GO:0016538|GO:0044772
Seca3g01359 322 SMART cyclin_7 193 281 IPR013763 -
Seca3g01359 322 SMART cyclin_7 96 180 IPR013763 -
Seca3g01359 322 SUPERFAMILY Cyclin-like 56 186 IPR036915 -
Seca3g01359 322 Gene3D - 75 187 - -
Seca3g01359 322 FunFam G2/mitotic-specific cyclin 74 187 - -
Seca3g01359 322 ProSitePatterns Cyclins signature. 91 122 IPR006671 -
Seca3g01359 322 SMART Cyclin_C_2 189 312 IPR004367 -
Seca3g01359 322 PANTHER CYCLINS 55 300 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01359 Seca-Chr3 23315004 23317696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01359 2 321 Core Cell Cycle Gene Families AT1G47230 52.537 3.07e-118 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01359 K06627 - gmx:100787417 370.548