Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01348 ATGGTCATCACGAACTTCAACGGAGCCGGCGTTGGATTTGGTTTCGGTGTTGGTTGCGGTTTCGGTGTAGGATGGGGTTTCGGAGGTATGCCATTGAACTTCTTGGGTCTTGGTGTAGGTGGAGGTTGTGGCGTTGGAGTAGGACTTGGTTGGGGGTTTGGTACTGCATTTGGTAGCAAGTATCGGTCATCACGGATCACATTTCAAGGAGTGGAATTTGATAGTAAGGAGAAAGGTAACAGCACGGAGTTGTCAAAACCCACCCCAGAAATAAGAGGAATTTCCCTCATGGCAGAACGAAAGGTTTTCACCATCTCACAGGTTGCCCAACACAAATCCAACAAAAACTGTTGGGTGGTGATCAATGGCAGAGTGTTGGATGTGACAAAGTTCTTGGAGGAACACCCAGGAGGGGAAGAGGTGATCCTAGAGGTGGCTGGGAAGGATGCAACTAAGGAGTTTGAAGCTGTTGGACACAGCAAAGAAGCTCAAAACTTGGTCCTAAAATACCAAGTGGGTGTCCTTCAAGGTGCCACAGTTCAAGAGATAGACTACAAGGATGTTATGGACAAGGAACCTAAGAGCAAAGAGATGAGTGCCTATGTTATCAAAGATGATGCCGTGCCCAAATCTGTCACATTTTTCGAGTTCTTTGTTCCACTTCTTCTTGCCACTCTCTATTTTAGTTACCGATGCCTCACCAGAGCAGACCCTGTTACTTACTAG 726 0.4683 MVITNFNGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGVGGGCGVGVGLGWGFGTAFGSKYRSSRITFQGVEFDSKEKGNSTELSKPTPEIRGISLMAERKVFTISQVAQHKSNKNCWVVINGRVLDVTKFLEEHPGGEEVILEVAGKDATKEFEAVGHSKEAQNLVLKYQVGVLQGATVQEIDYKDVMDKEPKSKEMSAYVIKDDAVPKSVTFFEFFVPLLLATLYFSYRCLTRADPVTY. 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01348 241 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 131 138 IPR018506 GO:0020037
Seca3g01348 241 PRINTS Cytochrome B5 signature 135 149 IPR001199 -
Seca3g01348 241 PRINTS Cytochrome B5 signature 125 135 IPR001199 -
Seca3g01348 241 PRINTS Cytochrome B5 signature 150 157 IPR001199 -
Seca3g01348 241 PRINTS Cytochrome B5 signature 163 175 IPR001199 -
Seca3g01348 241 Pfam Cytochrome b5-like Heme/Steroid binding domain 105 175 IPR001199 -
Seca3g01348 241 PANTHER CYTOCHROME B5 97 233 - -
Seca3g01348 241 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 100 176 IPR001199 -
Seca3g01348 241 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 97 179 IPR036400 -
Seca3g01348 241 FunFam Cytochrome b5 type B 97 180 - -
Seca3g01348 241 Gene3D - 95 181 IPR036400 -
Seca3g01348 241 SMART Cyt_b5_2 103 176 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01348 Seca-Chr3 23124627 23130604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01348 101 235 NADPH P450 reductases AT5G48810 45.185 8.99e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01348 - - psat:127088049 303.908