Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01345 ATGGACAAGTTCAACATGCCAGCAAGTTTCAATGATCATCTCCAGTGGTACGATTCCTCACTGAAATCAGTATCAGACTCTGCAGAGATGCTGTATACATACAAACATGTAGCTCACGGCTTCTCCACAAGACTAACTACACAAGAAGCAGAGTTACTTGCAAAACAACCGGGAATTCTCTCTGTTGTCCCTGAAGTTAGATACGAGCTTCATACAACTCGAACACCAGAGTTCCTTGGATTGGAAAAAACCAGCACTTTTTCACTCGCCTCTGGAAAACAGAGCGACGTGATAGTTGGAGTGCTTGACACTGGAGTTTGGCCTGAACTCAAAAGCTTCGATGACACTGGACTTGGGCCAGTACCCAGTAGCTGGAAAGGTGGGTGTGAAAGAGGTAAAAATTTCAACTCATCAAATTGTAACAGGAAACTTGTTGGTGCAAGGTTTTTCGCCAAAGGGACAGAATCAAAGTCACCAAGGGATGATGATGGGCATGGAAGTCACACCTCAACTACAGCAGCAGGATCTGCAGTTACAGGAGCTAGCCTCTTTGGTTATGCTTCTGGGACAGCAAGAGGCATGGCCACACAAGCCCGAGTGGCAACTTACAAAGTGTGTTGGATTGGTGGATGCTTTACATCAGACATCGCTGCTGGAATTGACAAGGCCATTGAAGATGGTGTCCACATCCTTTCCATGTCTATTGGGGGAGGTTTAACGGACTACTACAGAGACACTGTTGCAATTGGAACTTTTGCAGCCGCAGCTCATGGAATACTAGTATCCAATTCAGCAGGAAATGGTGGGCCTAGTCAAGCAACGTTGTCTAGTGTGGCGCCATGGGTAACCACTGTTGGTGCTGGAACTATAGACCGTGATTTCCCTGCCTATATCACCCTTGGAAATGGGAAGAGATACACTGGTGTATCTCTTTACAATGGCAAACTGCCATCTGGTTCTCCACTGCCACTTGTCTATGCTGGTATTGTCAGCAATGATTCCTCCGGAAATCTGTGCACTGAAGGTAGTTTGATTCCTGGAAAAGTTTCAGGAAAAATCATAATATGTGATCGGGGAGGAACTCCTAGGGTGGAAAAGGGTATGGTGGTCAAGAAGGCTGGAGGCATTGGGATGATTTTAGCCAACAATGAAGAGTATGGAGAAGAGCTAGTTGCTGACTCCTATCTCCTCCCTGCAACAGCTTTGGGCCAGAAATCCAGCAATGAAGTAAAGAAGTATGTTTTTTCTGCTCCCAACCCCACAGCTAAAATTGCATTTGGTGGTACCCAGTTAGGGGTTCAACCGTCCCCAGTGGTGGCAGCTTTCAGCTCCAGAGGACCAAATACGCTCACACCAAAAATACTCAAACCAGACCTGATAGCTCCAGACACTAGGCATGTGAGCTTCAATATCATCTCTGGCACATCCATGTCATGCCCCCATGTTAGTGGGTTAGCTGCTCTCCTTAAGGGAGCTCATCCTGAATGGAGCCCTGCAGCTATAAGGTCTGCCCTCATGACCACAGCCTATAGAACTTACAAAAATGGGCAAACCATAAAAGATATTGCCACTGGGCTACCAGCTACACCGTTTGATTATGGTGCTGGGCACGTGGATCCAGTAGCTGCTCTTGATCCTGGTCTTGTGTATGATGCTACCGTGGATGACTACTTGAGCTTCTTCTGTGCCTTGAACTACACTTCGTTTCAAATAAAGCTTGCCACAAGAAGAGATTTTACCTGCGACAAAAGGAAGAAGTACAGAGTAGAAGACCTCAACTACCCATCTTTTGCTGTTCCTTTTGACACGGCTGCAGGCGTAGGGGGTGGTTCTCATACACCAAGCACTGTCCAGTATAAAAGGATTTTAACTAACGTAGGCACCCCAGCAATATATAAAGTTTCAGTGTCATCACAGTCTCCCTCAGTGAAGATTGTGGTTGAACCACAAACACTTAGTTTCAGGGAACTGAACGAAAAGAAGAGCTACACGGTTACATTCACGGCTTCTTCAATGCCTTCTGGCACAACCAGCTTCGCTCATCTGGATTGGTCAGATGGGAAACATAAGGTCACTAGTTCCATTGCTTTCAGCTGGACTTGA 2103 0.4636 MDKFNMPASFNDHLQWYDSSLKSVSDSAEMLYTYKHVAHGFSTRLTTQEAELLAKQPGILSVVPEVRYELHTTRTPEFLGLEKTSTFSLASGKQSDVIVGVLDTGVWPELKSFDDTGLGPVPSSWKGGCERGKNFNSSNCNRKLVGARFFAKGTESKSPRDDDGHGSHTSTTAAGSAVTGASLFGYASGTARGMATQARVATYKVCWIGGCFTSDIAAGIDKAIEDGVHILSMSIGGGLTDYYRDTVAIGTFAAAAHGILVSNSAGNGGPSQATLSSVAPWVTTVGAGTIDRDFPAYITLGNGKRYTGVSLYNGKLPSGSPLPLVYAGIVSNDSSGNLCTEGSLIPGKVSGKIIICDRGGTPRVEKGMVVKKAGGIGMILANNEEYGEELVADSYLLPATALGQKSSNEVKKYVFSAPNPTAKIAFGGTQLGVQPSPVVAAFSSRGPNTLTPKILKPDLIAPDTRHVSFNIISGTSMSCPHVSGLAALLKGAHPEWSPAAIRSALMTTAYRTYKNGQTIKDIATGLPATPFDYGAGHVDPVAALDPGLVYDATVDDYLSFFCALNYTSFQIKLATRRDFTCDKRKKYRVEDLNYPSFAVPFDTAAGVGGGSHTPSTVQYKRILTNVGTPAIYKVSVSSQSPSVKIVVEPQTLSFRELNEKKSYTVTFTASSMPSGTTSFAHLDWSDGKHKVTSSIAFSWT. 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01345 700 Gene3D - 561 699 - -
Seca3g01345 700 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 71 IPR037045 -
Seca3g01345 700 FunFam subtilisin-like protease SBT1.5 291 431 - -
Seca3g01345 700 CDD Peptidases_S8_3 68 510 IPR034197 -
Seca3g01345 700 Pfam PA domain 323 406 IPR003137 -
Seca3g01345 700 FunFam Subtilisin-like protease SBT1.5 96 300 - -
Seca3g01345 700 Gene3D Peptidase S8/S53 domain 96 557 IPR036852 GO:0004252|GO:0006508
Seca3g01345 700 SUPERFAMILY PA domain 346 385 IPR046450 -
Seca3g01345 700 SUPERFAMILY Subtilisin-like 70 548 IPR036852 GO:0004252|GO:0006508
Seca3g01345 700 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Seca3g01345 700 PRINTS Subtilisin serine protease family (S8) signature 473 489 IPR015500 -
Seca3g01345 700 PRINTS Subtilisin serine protease family (S8) signature 161 174 IPR015500 -
Seca3g01345 700 ProSitePatterns Serine proteases, subtilase family, serine active site. 474 484 IPR023828 -
Seca3g01345 700 Pfam Subtilase family 95 518 IPR000209 GO:0006508|GO:0008236
Seca3g01345 700 MobiDBLite consensus disorder prediction 153 173 - -
Seca3g01345 700 Pfam Fibronectin type-III domain 591 696 IPR041469 -
Seca3g01345 700 ProSiteProfiles Serine proteases, subtilase domain profile. 67 544 - -
Seca3g01345 700 CDD PA_subtilisin_like 297 424 - -
Seca3g01345 700 Gene3D - 291 432 - -
Seca3g01345 700 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 696 IPR045051 -
Seca3g01345 700 Pfam Peptidase inhibitor I9 5 71 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01345 Seca-Chr3 23111269 23113461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01345 1 700 Subtilisin-like Serine Gene Family AT5G67360 63.661 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01345 - - gmx:100794284 1193.33