Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01339 ATGCAGAGCCTGTCAAGTAGGCTTTTGTGTTCTTCCAATTCGTTGTTTGGGTCAGCCGTCACTGCCACTCTTCCCTCTTCTTCTCTTAGATTTCCATCACACTTTCCAAGGATCGCTAATTCAACACCGTCCTCTTCGATTCGTTTACGATCCACTGCTTCTTCATGTACTTTCTCATCAACGAGTGACTCGCCACAAATGGCTTCCAACGATTTTCAAGATCAAGACCAACGTATAGCAAAAATCTCCTCTGCGATCCGTGTGATCCCTGACTTTCCTAAGCCAGGTATTATGTTCCAAGATATAACCACGCTGCTTCTTGATACAAAGGCTTTCAGAGATACGATTGACTTGTTTGTTGAGAGGTACAGAGATCAAAATATTTCTGTTGTAGCAGGTATTGAAGCAAGAGGCTTTATATTTGGCCCACCCATTGCATTAGCTATTGGAGCAAAATTCGTCCCCATGAGGAAACCCAATAAATTGCCAGGAGAGGTTATCTCAGAAGAGTATTCTTTGGAGTATGGAACTGACAAAATGGAGATGCACGTAGGGGCTGTACAACAGGGAGAACGAGCCTTAGTCATAGATGATCTTATTGCCACTGGGGGAACATTATGTGCTGCCATTAGGCTACTAGAACGTGTTGGTGTGCACGTTGTGGAGTGTGCTTGTGTGATTGAATTACCAGAGTTGAAGGGGCGGGATAGGCTGGGCGATAAGCCGCTATTCGTCTTGGTTAAAGGAGCCTGA 753 0.4489 MQSLSSRLLCSSNSLFGSAVTATLPSSSLRFPSHFPRIANSTPSSSIRLRSTASSCTFSSTSDSPQMASNDFQDQDQRIAKISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYRDQNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDKMEMHVGAVQQGERALVIDDLIATGGTLCAAIRLLERVGVHVVECACVIELPELKGRDRLGDKPLFVLVKGA. 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01339 250 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 69 248 - -
Seca3g01339 250 Hamap Adenine phosphoribosyltransferase [apt]. 82 249 IPR005764 GO:0003999|GO:0005737|GO:0006168
Seca3g01339 250 Pfam Phosphoribosyl transferase domain 112 243 IPR000836 -
Seca3g01339 250 Gene3D - 69 248 IPR029057 -
Seca3g01339 250 CDD PRTases_typeI 116 248 IPR000836 -
Seca3g01339 250 SUPERFAMILY PRTase-like 82 243 IPR029057 -
Seca3g01339 250 FunFam Adenine phosphoribosyltransferase 1 70 249 - -
Seca3g01339 250 NCBIfam adenine phosphoribosyltransferase 83 247 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01339 Seca-Chr3 23017717 23022896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01339 67 250 PRT Gene Family AT1G27450 81.522 5.54e-109 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01339 K00759 - gmx:100777103 340.117