Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01324 ATGGTGGGAGTCGCGGTGGCGACCAAGAATGGGAACAACAACGGAAGAAACAAGAATGAGAAGAAAATGAGGGTTTCACGACAAGGCTTGGGCTCAAGTGGAACAATTTTTCATTTTGCAGCAAAAAGCTTTAATTTCACAACAAAGACGATGAAAGGGGGAACGGTTTTCGCAATTTGCAATTCACAGAGAGAAAGGAGGGAAAGAGTGCCTCCTACTATCAACATTGAACCTGAACACTGCCCTGAAGCAGTGATTGAGTGGTACAGAATCTCTGGCTTAGAAGATAGCAGAGAAAGTGCAACAAGAAAGGATGTTGCTCTCAAATCAAAGCAGCACCTCCGTTTTCTGGGTTGGAATTTTTGTTACATTGACAAAAAAGGTAGGTGGGAACTTCGTTACACATCACCCTCCACTGGCAAGAACTTCAAATTCATAGATTTTCCCTTTTGCACAACCAAGTCAAGAAGAGAAAAGATCAATTTCCTCTTCTGA 495 0.4242 MVGVAVATKNGNNNGRNKNEKKMRVSRQGLGSSGTIFHFAAKSFNFTTKTMKGGTVFAICNSQRERRERVPPTINIEPEHCPEAVIEWYRISGLEDSRESATRKDVALKSKQHLRFLGWNFCYIDKKGRWELRYTSPSTGKNFKFIDFPFCTTKSRREKINFLF. 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01324 164 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01324 Seca-Chr3 22800463 22801966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01324 74 143 PHD Transcription Factor Family AT5G63900 36.620 2.21e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01324 - - mtr:25489963 118.242