Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01313 ATGTCAATGCAGTGGAGTGAAGCATCCAATGAAGAACCCCAATTTTGTGAGGACGTTGAACACATGTCATTATATTCATATGATTCATATGAAAGTGGTGGTGATGAACATAATGATTATGTTGATAGTGATCATTGTGACAATGATGAATCAGATAGCGATGAATGTGTTCAAGAAGAAGAGGATGATGGAATGGGGAATGAGCCTTGGGAGATGCGTCACATTGAAGACTTTACCAACATTGATACAGTTGAAGACATCAAATTACTGGATTTTGACCACATGGGTCCACTTGAATTAAGCAAATTTGATTTTGCAAGTGTTGAGATAGCATATAAGTTTTATGTTAGGTATGCAAGGGTAAAAGGCTTCGGGGTTCGTAAAAGCAACAAGCTTAAAAACAAGGAAGGAGTTGTAACAGGTCAAACTTTTGTTTGCAACAGAGAAGGTGAAAGAGAGCATAGAGGATTGAGGGTAGAAGAGCAAAAACAAAAGGAGAAGGCCCTAACTAGGTGTGGTTGTAAGGCGATGTTTAGAGTCCATGTTGATGTTTACAGTGGTCGATGGTATGTAACAGTTTTTGAGGATGAACATAACCATCAACCTTTAGAGGATCTTTATTGTGGCATGCTACCGGTGCATAGGCAAATGAATGCCAGTCAAATGTTGCAGATCAATAATATGATGAAGGCGGGAATTCGACCCCCGCAGATTTTTGGTTCATTTGCTAGGCAAGCAGGAGGGTTTGAAAAGATAGGCTTCCGAAAACAGGACATCTATAATCAGATTGGGCGACAAAGACGCCTAAAAGGTTCAGATGGCTTTTCTGCGCTTAATTACCTTAATAATCTACGGATGAAGGATCCACTAATGGTGGTTAGGCATACGGTAGATGAACAGGGCAGACTGCAACATTTGTTTTGGTCAGATGGATTTTGTCAGATGGACTTCATGGTCTTTGGAGATGTCATTGCATTTGATGCAACATATCGCAAGAACAAGTATCGATGCCCAGTCGTGATATTTTCCGGTGTCAATAAGCATAATCACACTGTGGTGTTTGCTTGTGCAATAGTATCGAATGAGACAGAAGAAACCTATGTCTGGCTACTTGAACAGTTCAAGGAAACGATGAGGGGGAAATTCCCATCTTCTATCATCACCGATGGAGATATCGCGATGAGGAATGCCATTAAACGCGTCTTTCCTTCCAGTCATCATCGACTTTGCGCATGGCATCTGATAAGGAATGCGACAAGTAACATTAAAATTCCAGGTTTCACGACTGAATTCAAGAAATGCATGTTATATGATTATGATCTCGGCCAATTTCAGCGGAGATGGAAACAAATGGTTGCAAAATTTGGTGTTGAGGACCACTGGTGGGTTAAAGAAATGTATGAGAAGAAGTCAATGTGGGCAACTTCGTATATTCGGGGTAAGTTTTTTGCTGGTTTTAGAACTACCTCTCGTTGTGAGGGTCTTCACTCTCAAATTGGAAGACATGTTAATTCAAGGACCACAATTTCGGAATTTGTTGAGCAGTTTCAGTTGTATCTTTATGCCATGCGGTTTCGAGAAGCTGAATTCGACTTTGTGTCCACATATGGTGAACCGGTTTTGCGGACAAATTTTCATGCATTGGAGAAGTCAGCTGTGAATGTTCTAACTCGGGACCTTTTTTACTTATTTCAATCAATTTTGGTGAAATCAACTGTCATGTCTGTTGTTCGACATGAACTTTATTTTCAAATGCACGAGTGGCATGTAATACCATTTGATTTGGGGGTGAACTGTGTTATATAA 1806 0.4025 MSMQWSEASNEEPQFCEDVEHMSLYSYDSYESGGDEHNDYVDSDHCDNDESDSDECVQEEEDDGMGNEPWEMRHIEDFTNIDTVEDIKLLDFDHMGPLELSKFDFASVEIAYKFYVRYARVKGFGVRKSNKLKNKEGVVTGQTFVCNREGEREHRGLRVEEQKQKEKALTRCGCKAMFRVHVDVYSGRWYVTVFEDEHNHQPLEDLYCGMLPVHRQMNASQMLQINNMMKAGIRPPQIFGSFARQAGGFEKIGFRKQDIYNQIGRQRRLKGSDGFSALNYLNNLRMKDPLMVVRHTVDEQGRLQHLFWSDGFCQMDFMVFGDVIAFDATYRKNKYRCPVVIFSGVNKHNHTVVFACAIVSNETEETYVWLLEQFKETMRGKFPSSIITDGDIAMRNAIKRVFPSSHHRLCAWHLIRNATSNIKIPGFTTEFKKCMLYDYDLGQFQRRWKQMVAKFGVEDHWWVKEMYEKKSMWATSYIRGKFFAGFRTTSRCEGLHSQIGRHVNSRTTISEFVEQFQLYLYAMRFREAEFDFVSTYGEPVLRTNFHALEKSAVNVLTRDLFYLFQSILVKSTVMSVVRHELYFQMHEWHVIPFDLGVNCVI. 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01313 601 Pfam MULE transposase domain 323 417 IPR018289 -
Seca3g01313 601 Pfam FAR1 DNA-binding domain 113 201 IPR004330 -
Seca3g01313 601 MobiDBLite consensus disorder prediction 45 66 - -
Seca3g01313 601 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 102 578 IPR031052 GO:0006355
Seca3g01313 601 MobiDBLite consensus disorder prediction 27 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01313 Seca-Chr3 22682456 22684414 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g01313 MULE 3.8e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01313 - - tpra:123913749 626.706