Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01308 ATGTCAATGCAGTGGAGTGAAGCATCCAATGAAGAACCCCAATTTTGTGAGGACGTTGAACACATGTCATTATATTCATATGATTCATATGAAAGTGGTGGTGATGAACATAATGATTATGTTGATAGTGATCATTGTGACAATGATGAATCAGATAGCGATGAATGTGTTCAAGAAGAAGAGGATGATGGAATGGGGAATGAGCCTTGGGAGATGCGTCACATTGAAGACTTTACCAACATTGATACAGTTGAAGACATCAAATTACTGGATTTTGACCACATGGGTCCACTTGAATTAAGCAAATTTGATTTTGCAAGTGTTGAGATAGCATATAAGTTTTATGTTAGGTATGCAAGAGTAAAAGGCTTCGGGGTTCGTAAAAGCAACAAGCTTAAAAACAAGGAAGGAGTTGTAACAGGTCAAACTTTTGTTTGCAACAGAGAAGGTGAAAGAGAGGACAGAGGATTGAGGGTAGAAGAGCGAAAACGAAAGGAGAAGGCCCTAACTAGGTGTGGTTGTAAGGCGATGTTTAGAGTCCATGTTGATGTTTACAGTGGTCGATGGCGAATGAATGCCAGTCAAATGTTGCAGATCAATAATATGATGAAGGCGGGAATTCGACCCCCGCAGATTTTTGGTTCATTTGCTAGGCAAGCAGGAGGGTTTGAAAAGATAGGCTTCCGAAAACAGGACATCTATAATCAGATTGGGCGACAAAGACGCCTAAAAGGTTCAGATGACTTTTCTGCGCTTAATTACCTTAATAATCTACGGGTGAAGGATCCACTAATGGTGGTTAGGCATACGGTAGATGAACAGGGCAGACTGCAACATTTGTTTTGGTCAGATGGATTTTGTCAGATGGACTTCATGGTCTTTGGAGATGTCATTGCATTTGATGCAACATATTGCAAGAACAAGTATCGATGCCCAGTCGTGATATTTTCCGGTGTCAATAACCATAATCACACTGTGGTGTTTGCTTGTGCAATAGTGTCGAATGAGACAGAAGAAACCTATGTCTGGCTACTTGAACAGTTCAAGGAAACGATGAGGGGGAAATTCCCATCTTCTATCATCACCGATGGAGATATCGCGATGAGGAATGCCATTAAACGCGTCTTTCCTTCCAGTCATCATCGACTTTGCGCATGGCATCTGATAAGGAATGCGAGAAGTAACATTAAAATTCCAGGTTTCACGACTGAATTCAAGAAATGCATGTTATATGATTATGATCTCGGCCAATTTCAGCGGAGATGGAAACAAATGGTTGCAAAATTTGGTGTTGAGGACCACTGGTGGGTTAAAGAAATGTATGAGAAGAAGTCAATGTGGGCAACTTCGTATATTCGGGGTAAGTTTTTTGCTGGTTTTAGAACTACCTCTCGTTGTGAGGGTCTTCACTCTCAAATTGGAAGACATGTTAATTCAGGGACCACAATTTCGGAATTTGTTGAGCAGTTTCAGTTGTATCTTTATGCCATGCGGTTTCGAGAAGCTGAATTCGACTTTGCGTCCACATATGGTGAACCGGTTTTGCGGACAAATTTTCATGCATTGGAGAAGTCAGCTGCGAATGTTCTAACTCGGGACCTTTTTTACTTATTTCAATCAATTTTGGTGAAATCAACTGTCATGTCTGTTGTTCGACATGAACTTTATTTTCAAATGCACGAGTGGCATGTAATACCATTTGATTTGGGGGTGAACTGTGTTATATAA 1728 0.4062 MSMQWSEASNEEPQFCEDVEHMSLYSYDSYESGGDEHNDYVDSDHCDNDESDSDECVQEEEDDGMGNEPWEMRHIEDFTNIDTVEDIKLLDFDHMGPLELSKFDFASVEIAYKFYVRYARVKGFGVRKSNKLKNKEGVVTGQTFVCNREGEREDRGLRVEERKRKEKALTRCGCKAMFRVHVDVYSGRWRMNASQMLQINNMMKAGIRPPQIFGSFARQAGGFEKIGFRKQDIYNQIGRQRRLKGSDDFSALNYLNNLRVKDPLMVVRHTVDEQGRLQHLFWSDGFCQMDFMVFGDVIAFDATYCKNKYRCPVVIFSGVNNHNHTVVFACAIVSNETEETYVWLLEQFKETMRGKFPSSIITDGDIAMRNAIKRVFPSSHHRLCAWHLIRNARSNIKIPGFTTEFKKCMLYDYDLGQFQRRWKQMVAKFGVEDHWWVKEMYEKKSMWATSYIRGKFFAGFRTTSRCEGLHSQIGRHVNSGTTISEFVEQFQLYLYAMRFREAEFDFASTYGEPVLRTNFHALEKSAANVLTRDLFYLFQSILVKSTVMSVVRHELYFQMHEWHVIPFDLGVNCVI. 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01308 575 Pfam FAR1 DNA-binding domain 113 192 IPR004330 -
Seca3g01308 575 MobiDBLite consensus disorder prediction 45 66 - -
Seca3g01308 575 Pfam MULE transposase domain 297 391 IPR018289 -
Seca3g01308 575 MobiDBLite consensus disorder prediction 27 68 - -
Seca3g01308 575 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 102 552 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01308 Seca-Chr3 22655947 22657905 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g01308 MULE 2.6e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01308 - - tpra:123913749 581.637