Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01307 ATGCCTGGTCAAACCTACTTTGTTCTTCCAATTGATTGTTTTGCAATTGACACACTCTCTGTATCTTCCATATCTTCTTTTGGATCATGTCCTAACAAGTTACCTATTAAGTTTGGGAAATGCCCTTTTCAGTATTTGAAAGGTTCTAATGGAAGGGTCTTGATAAAGGAATTCAAGCAGTTGAGTTTTGACACAATTGAGCTGAATGTGAGCTCACTTGGAATTGCTAAAGAAACCTTTTTGAGATTTGTTAGCTTGGTCAAAAGTTGTGGTCTGAAAGCTAAGCCTCTTTTTAAAATGAAGTTTAATGAGTCTGATATTCCCAAAGGTGGTGATAGGGATTATGGGGCTTATATTCCCCCAAAACCTATATCATTTGGTTTGACAAAAGAATCACTGCTTTTCCTGAAGTCAAGTTTGGAAGAGATGGGATTGATGTGTAAACAGGACCCGTGGTTGTGA 462 0.3766 MPGQTYFVLPIDCFAIDTLSVSSISSFGSCPNKLPIKFGKCPFQYLKGSNGRVLIKEFKQLSFDTIELNVSSLGIAKETFLRFVSLVKSCGLKAKPLFKMKFNESDIPKGGDRDYGAYIPPKPISFGLTKESLLFLKSSLEEMGLMCKQDPWL. 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01307 153 Pfam (2R)-phospho-3-sulfolactate synthase (ComA) 53 105 IPR003830 -
Seca3g01307 153 SUPERFAMILY (2r)-phospho-3-sulfolactate synthase ComA 52 107 IPR036112 -
Seca3g01307 153 Gene3D Aldolase class I 37 117 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01307 Seca-Chr3 22646525 22647438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01307 55 139 Subtilisin-like Serine Gene Family AT4G21320 47.059 1.02e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01307 - - gmx:100805668 111.694