Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01265 ATGAAGTCCATGAATGATAGTAACACTGATGATAGAAACAATCATAACTGGTTGGGGTTCTCTCTCTCACCCCACATGAAAATGGAGGTTACTTCTTCTGGTCCTCCACAGCAACATCATCATCACTACCATCATCAACAAACTCAGGCTTCTGCAGCTGGTTCTGTTTCTAACACTGTTCCGACAACCTTCTACTTGTCCCCTTCTCACATGGGCAACTCTGGTATCTGTTATGGTGTTGGGGAAAATGGTAACTTTCATTCTCCTTTGACTGTTATGCCTCTCAAGTCAGATGGGTCACTTTGTATCATGGAAGCTCTCAGTAGATCACAAACACAAGTGATGGTACCTACTTCATCTCCCAAACTGGAGGACTTCCTTGGTGGTGCAACTATGGGAACTCATCAATATGGAAGCCATGAAAGAGAAGCAATGGCTCTGAGCTTAGACAGCATCTATTACAATAGCCAAAATGCAGATCCTCAAGCCAACAGAGACCATTCCTTGGGGCTTCTTTCAGAACCTTTCAGGCAACAAGGCCATATGAATGTCCAATCACATCCATATTATTCAGGACTTGGTTGCCATGGGATATATCAAGCCCCATTAGAGGAAGAAACTAATAAGGAAACACATGTTACAGTTTGCAGCTCCCAAATGCCTCAAATGGCATCAGAAGAAGGCATTGCTTGTTTGAAAAACTGGGTGCCGCAAAGAGAGTATTCTTCTCAGCAGGCTCTGGAGCAGCAAATGAACTGTAGTAGTAACATGGGGAATGATCGTGGAGCTGCTGCTACTGTTGGTACTGCTGTAGGGTGTGGTGAGTTGCAGTCTCTAAGCTTATCAATGAGTCCTGGTTCACAATCTAGCTGTGTCACAGCTCCTAGGCAGATCTCACCTTCTGGAACAGACTCAGTGGCTATTGATTGCAAAAAGAGAGGAGCTGCTAAGCTGGGACAGAAGCAGCCTGTGCATAGGAAATCTATTGACACATTTGGACAGAGAACTTCACAGTATAGGGGTGTGACAAGGCATAGATGGACTGGTAGATATGAAGCACATTTGTGGGATAACAGTTGCAAGAAAGAAGGACAGACCAGAAAAGGAAGACAAGGTTAG 1119 0.445 MKSMNDSNTDDRNNHNWLGFSLSPHMKMEVTSSGPPQQHHHHYHHQQTQASAAGSVSNTVPTTFYLSPSHMGNSGICYGVGENGNFHSPLTVMPLKSDGSLCIMEALSRSQTQVMVPTSSPKLEDFLGGATMGTHQYGSHEREAMALSLDSIYYNSQNADPQANRDHSLGLLSEPFRQQGHMNVQSHPYYSGLGCHGIYQAPLEEETNKETHVTVCSSQMPQMASEEGIACLKNWVPQREYSSQQALEQQMNCSSNMGNDRGAAATVGTAVGCGELQSLSLSMSPGSQSSCVTAPRQISPSGTDSVAIDCKKRGAAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQG. 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01265 372 Gene3D AP2/ERF domain 337 371 IPR036955 GO:0003700|GO:0006355
Seca3g01265 372 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 116 371 - -
Seca3g01265 372 MobiDBLite consensus disorder prediction 26 55 - -
Seca3g01265 372 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01265 Seca-Chr3 21893096 21894643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01265 256 371 AP2-EREBP Transcription Factor Family AT4G37750 55.405 4.55e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01265 K09285 - gmx:100787223 519.235