Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01247 ATGTGCAGGACAAAATTGAAGCAAACGGAAGTGGAATGTGAGTTACTGAAGAAGTGCTGTGAGAGTCTAAGAGAGGAGAACAAGAGGCTGCAAAAGGAGCTGCAAGAGCTTAAATCGATGAAAACGACGACGTCTGGAGGACCCTTTTATATGCAGCTTCCAGTAGCCAGCCTTAGCATCTGTCCTTCTTGTAAGAGAATTAGCGGTGACGGAGGCAGCGGCAACAATAACAATGGATCTAATTCTCCGATTACCACGGCCTTGCTTATTGGCCCAAATAAGGCCCAACATCATCACTTCTATACATTCACCCAATCATCCGCAGCTTGTTAG 333 0.4595 MCRTKLKQTEVECELLKKCCESLREENKRLQKELQELKSMKTTTSGGPFYMQLPVASLSICPSCKRISGDGGSGNNNNGSNSPITTALLIGPNKAQHHHFYTFTQSSAAC. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01247 110 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 3 79 - -
Seca3g01247 110 SMART halz 7 53 IPR003106 GO:0006355|GO:0043565
Seca3g01247 110 Coils Coil 6 43 - -
Seca3g01247 110 Pfam Homeobox associated leucine zipper 7 41 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01247 Seca-Chr3 21436755 21437087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01247 3 110 Homeobox Transcription Factor Family AT4G37790 50.459 3.42e-26 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01247 K09338 - gmx:100790927 113.235