Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01242 ATGTGTGATGAAGAATTGAAATCTGTAGTTGGTGCGGTTTTTGATACTTTAGAAGAAGGAGAAAACTTTTATAAAAGGTATGCACATGCTGCTGGTTTTAGTGTACGCAAGTCATCTGAAACAAAAGATAAAAATGGTGTAAAGTGGAAATATTTTCTTTATTCAAAACAAGGTTTTAAAGTTGAGAAAAAAAAGGCCATGGTTGAGTTGCTTGTTGGTGAAAAAAAATTGCATGCCTAA 240 0.325 MCDEELKSVVGAVFDTLEEGENFYKRYAHAAGFSVRKSSETKDKNGVKWKYFLYSKQGFKVEKKKAMVELLVGEKKLHA. 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01242 79 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 65 - -
Seca3g01242 79 Pfam FAR1 DNA-binding domain 22 66 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01242 Seca-Chr3 21297689 21297928 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g01242 FAR1 2.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01242 - - mtr:120577464 107.842