Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01170 ATGCAGCCTCACCATGAAATGCCCAATACTAATAATACCCTTTATCACCAACTCATGGTTGATGATTGTCACACATCCACTCTCCACACCCCAACTCCCTTGAGGCCAAACCATAATGGTCACCATCTTACAACTCAACACTACTATTCTCAATTTCAACAACACAAAGAACTATGTCATGAGTATGACCAATTGTCTCAACACCCACATCAATTTCAGCCACCACAACAACAACATCCACATTTTTTTGGAGGCAATGGACATCATAATTGTGAAGAATCCACAGCCAGAGTATCTTTTTGGAAAGCATTCAACACAGTGCTCTCTGATGCAAAGGAAAAACACCAACAGGTAAACGAAAACGAAAGATGCAATTTTGGGGAGCTTGAAGCTGTGTTCATACTTGCTCAAACTGCAGGTTCTAATTCTGCACTTGCTGTTGAAAACTCGCATACACAGGCCAATGTGTCAGCCACTGCTACAATTGGGGTAACTAATTCTGAAGCGTTATTGGCAGAAGAGGCTTCGATGAAGAGAGCTAGAAAAAAGATGAGAAAGAAGAAAAAGGAGGAAGAAATGCGTTTGATGAGTGCGTTTTTTAAGAGATTGGTGAAACGTGTGATTAATCACCAGGAGGTTCTTCAGAGTAAATTCCTTGAGGCAATTGAGAGAATGGATAGAGAGAGAGCAGAGAGGGAAGAAGCATGGAGACTTCAAGAAACTGAAATATATGAGAGAGAAGCTGTTGCTAAAGCTCAGGAGAGAGATCTGGCTTCAAGAAGACACTCTTCCATTATCTCCACCATAGAGAAAATAACTGGTCAAACCTTCAATTTTGTTTCCGACCAATTATCCTAA 858 0.4091 MQPHHEMPNTNNTLYHQLMVDDCHTSTLHTPTPLRPNHNGHHLTTQHYYSQFQQHKELCHEYDQLSQHPHQFQPPQQQHPHFFGGNGHHNCEESTARVSFWKAFNTVLSDAKEKHQQVNENERCNFGELEAVFILAQTAGSNSALAVENSHTQANVSATATIGVTNSEALLAEEASMKRARKKMRKKKKEEEMRLMSAFFKRLVKRVINHQEVLQSKFLEAIERMDRERAEREEAWRLQETEIYEREAVAKAQERDLASRRHSSIISTIEKITGQTFNFVSDQLS. 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01170 285 PANTHER FI21293P1 112 275 - -
Seca3g01170 285 Coils Coil 170 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01170 Seca-Chr3 20171453 20173007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01170 198 273 Trihelix Transcription Factor Family AT1G76880 42.105 1.01e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01170 - - gmx:102664417 212.231