Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01156 ATGATGCACATGACCTTTTACTGGAGCAACAAGGTCACTCTTCTCATCGATTCATGGAAGACTCATTCATGGTTAGGTTATATCCTCACTTTAATTGCTTGTCTTATCGTCGCTCTTTTCTACCAATTTCTCGAGAATCGCCGGATTCGCCTCAAGCTTTTCGCCGCCGGGAGGGATTTTCCGCAGGAGATCCAGACTCCTCTTCTGCGACGGAAACTCGTCGGAAACAGAGCTAAGGCCGGTGTTAAGGTCGCCGGAGCGCTTCTCTTTGGTCTCAGCTCCGCGATCGGGTATCTGTTGATGTTGGCCGTTATGTCGTTCAACGGTGGGGTCTTTATTGCCATTGTCGTTGGTCTCGCCATTGGTTACTTCTTCTTTAGGAGCGATGGTGAAGATTCCGTTGTCGTTGACAGTTCTTGCGCCTGTGCTTAA 432 0.4931 MMHMTFYWSNKVTLLIDSWKTHSWLGYILTLIACLIVALFYQFLENRRIRLKLFAAGRDFPQEIQTPLLRRKLVGNRAKAGVKVAGALLFGLSSAIGYLLMLAVMSFNGGVFIAIVVGLAIGYFFFRSDGEDSVVVDSSCACA. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01156 143 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca3g01156 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01156 Seca-Chr3 19930706 19931137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01156 1 143 Inorganic Solute Cotransporters AT5G20650 56.000 4.28e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01156 K14686 - gmx:100815028 238.039