Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01135 ATGGTTGCTGGTAGGGCAAGAGCTGTTGTGGTGGGAGTTATTCCTAACACTGCCATGGGCAGCATATGTGATTCAATGTTGCGAACAGAGCATATAATATCTGTAATCACGGTAGTCTTGGGATTTGCTTCAGCAATACTGGGGCTGTTATGCTGCATAAGGAATTTGAGGGTAGATAATCTTGGGTGTTATCAAGAAGAGGCTGTTGCTGTTATGCATGAACTTCTTAGTTTTACCATTGAGAAGAGGCCGGTGACTGATCACTTCACTCACTTCCGTTAG 282 0.4397 MVAGRARAVVVGVIPNTAMGSICDSMLRTEHIISVITVVLGFASAILGLLCCIRNLRVDNLGCYQEEAVAVMHELLSFTIEKRPVTDHFTHFR. 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01135 93 Pfam Plant organelle RNA recognition domain 66 93 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01135 Seca-Chr3 19540122 19541417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01135 1 30 Primary Pumps ATPases(2) AT1G10130 73.333 2.27e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01135 - - zju:107420084 52.7582