Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca3g01120 | ATGGAGAAAGACTGTAACTGTATTGAGGATATGGAGATTGAAGTTCTCCCTTCAATGTGGCCTGAAGATATTGTAACTGATGTTGGAAAACAGTTCAATATAGAAAAGCCTGGAAGAGATCAAGATATGTTAGAAGAGGTTACAATCATAGAAGAGCCAACAATAGTTGATTTCAAGCGTCTCATGGAGCTCACAAGTTTCACAGAGAAAGGTTCTTCTCAATTAGCATACCTTATGAAACACTGGGAGTATAAACAAGCCAATGTTGTACGTCTTCTAAGGGAAGAACTCGATAACCTAAGCAAACAGAGAGAGGATGTCGAGTTACGGAAGTTGGAGATATTGGAAGAGCATCGATTTGAGGAAGAAAGATACGGTGGTGATAAACGTCCAGTTTCTATATTGGATGATATTTATGATATTTGGCAAGATGTACCGTGTAGGAAAAGTGATGTTGTGGTTCATAACAAGAGGATTGAAATTGAGGCTGAGTATGATACTGTTGTGTATTGGAAACAGCGAGCACTGCACTTGGAAAAGTTGTTGGAGGCGAGTATTCAGAGAGAACAGATACTTGAAGAGAAGTTACAAGAAAGTATAGAGAATATTGAAAGACAATCCTCACCTGTGGAAGAACTCTCTCAGATCCTTAAGAGAGCAGATAATTTCTTACATTTTATACTCCAAAATGCACCTGTTGTTATTGGCCATCAGGACAAAGAGTTGCGGTATCGCTTTATCTATAATCATTTTCCAAGTTTGCAAGAGGAGGACATTATAGGAAAAACGGATGTTGAAATATTCACAGGATCTGGAGTTAGGGAATCTCAAGATTTCAAGAGAGAAGTTTTGGAGAAAGGATTACCTGCAAAAAGGGAAATCACTTTTGAGACAGAGCTATTTGGGTCAAAGACATTCTTGATATATGTAGAGCCTGTCTTCAGCAAAGCAGGGGAGACAATTGGAATAAATTACATGGGAATGGATGTAACAGATCAGGTGAGAAAAAGAGAAAGGATGGCAAAGATTCGAGAAGAGATTGCTGTTCAGAAAGCCAAGGAAACAGAATTAAATAAAACCATTCACATTACAGAGGAAACTATGCGAGCTAAACAAATGCTGGCAACAATGTCTCATGAGATAAGATCTCCACTATCTGGGGTTGTTAGCATGGCTGAAATTCTTTCTACCACAAAACTTGATCGGGAGCAAAGACAACTCTTGGATGTTATGCTATCTTCAGGAGATTTGGTTCTTCAACTTATAAATGACATACTTGATCTTTCCAAGGTTGAGTCAGGAGTTATGAAGTTGGAAGCTACCAAATTTCGTCCAAGAGAGGTAGTAAGGCATGTACTCCAGACAGCTGCAGCATCATTGCAGAAAATATTAACCTTAGAAGGACATGTGGCAGATGATGTACCCATCGAGGTCATTGGTGATGTTTTAAGGATTCGGCAAATTCTCACAAATTTAATCAGCAATGGCATCAAGTTTACTCATGAAGGCAAAGTTGGGATAAATCTTTATGTTGTGCAAGAGCCAACTTTTGCAAAAGCAGAAGGCATCCAAAAGATGACTCAAGACCATTCAACTATTTCAGTGAATGGAGTGAAAGAAGAAAAATATCTCTCAACACATCAAAGTGGAAGTGATCGAAATCTTCCTGATGGTCAAAAACATGATGACCATCCCAGGCAAAACCATGCATTTAATGATGAATGTAGATCTCCTGTTAAAAGCGAATGCTCAATGAACGGAGACACTGAGGAGCAACATCATTCAAATGAAACAACAGTGTGGATACGTTGTGATGTATATGATACAGGCATTGGAATACCAGAAAACGCTATACCAACTTTATTTAAAAGGTACATGCAAGTCAGTGCAGACCACGCTCGAAAGTATGGTGGCACAGGGTTAGGACTAGCAATATGCAAACAACTGGTTGAGTTGATGGGGGGTAGTCTCACAGTGTCTAGCAAAGAAAATCATGGTTCTACCTTCACGTTCATACTCCCATACAAGGTTTCCATAGCTTGTGATAATTCTGATGATTCAGATGAGCTCTCAGACGTGGAGAATAATGATGCCAGGCCTGATGATACAACAGAGGGTTTCTTCCAATTCCAACCACCCACTTTGGGCTCTCTGTTCTCCTCTAATGGATCTAGTAGGACCCAGAAGTTATTGCCACACAAAATTGGATACACAAGCTCACATAAATTTAATGGGTTTTTAGAGAGTTCATCTTTATTCCCCTTTAATGACATCATATCAAAAGGGACATGTTCAGTTGATGATGCTTCTTCAGTGGTTGATGCTCCAGAGATGTCTGAATCAGCTAGCTCATCTGGTTACAGCTCAGAAACAAAGGACAGATGTTCAGTTAGAAGAGACAAACAACATCTATATAAGGCTCATGCTTGGTCCCAAGATGGTAGTGCCGTTTCTTCTCAACCTACAGTGGCAGATAGAGAAATGGCACTAGCAATGAAGTCAAGTGAACCCCAACAATCATGTCAGGATCGAGGCAAGACAAACACAACTAGCCAGTGTGTTACTAGCAGCAGTACATCAGATGTAACCAAATCCACATTAAAGCCTAAGATCCTTCTTGTTGAAGATAACAAAATTAATGTCATGGTGACACAATCCATGATGAAGCAGTTAGGTCATAGCATAGATGTTGTAAATAACGGGGCAGAAGCAGTACGTGCAGTTCAGCGCCATACTTATGATCTGGTTCTGATGGATGTCTGCATGCCAATTATGAATGGTCTTCAAGCAACAAAACTGATTCGGTCTTTTGAGGAAACAGGCAATTGGGATGCTGCAAGAAGTGCTGGAATCGAGCAAAGTCTACCAGATCCAGATTATGAATGTTCTGTACCATCTGCAAAGCGTATCCCCATTATTGCGATGACAGCAAATGCTTTGTCAGAGAGTGCTGAAGAGTGTTTTGCAAATGGTATGGATTCATTTGTGTCAAAACCTGTGACTTTCCAAAAATTGAAAGAGTGTCTTGAACAATTCCTAAGGTGA | 3045 | 0.399 | MEKDCNCIEDMEIEVLPSMWPEDIVTDVGKQFNIEKPGRDQDMLEEVTIIEEPTIVDFKRLMELTSFTEKGSSQLAYLMKHWEYKQANVVRLLREELDNLSKQREDVELRKLEILEEHRFEEERYGGDKRPVSILDDIYDIWQDVPCRKSDVVVHNKRIEIEAEYDTVVYWKQRALHLEKLLEASIQREQILEEKLQESIENIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGKTDVEIFTGSGVRESQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMDVTDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVRHVLQTAAASLQKILTLEGHVADDVPIEVIGDVLRIRQILTNLISNGIKFTHEGKVGINLYVVQEPTFAKAEGIQKMTQDHSTISVNGVKEEKYLSTHQSGSDRNLPDGQKHDDHPRQNHAFNDECRSPVKSECSMNGDTEEQHHSNETTVWIRCDVYDTGIGIPENAIPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGSLTVSSKENHGSTFTFILPYKVSIACDNSDDSDELSDVENNDARPDDTTEGFFQFQPPTLGSLFSSNGSSRTQKLLPHKIGYTSSHKFNGFLESSSLFPFNDIISKGTCSVDDASSVVDAPEMSESASSSGYSSETKDRCSVRRDKQHLYKAHAWSQDGSAVSSQPTVADREMALAMKSSEPQQSCQDRGKTNTTSQCVTSSSTSDVTKSTLKPKILLVEDNKINVMVTQSMMKQLGHSIDVVNNGAEAVRAVQRHTYDLVLMDVCMPIMNGLQATKLIRSFEETGNWDAARSAGIEQSLPDPDYECSVPSAKRIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLKECLEQFLR. | 1015 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca3g01120 | 1014 | CDD | HATPase_EvgS-ArcB-TorS-like | 485 | 674 | - | - | |
| Seca3g01120 | 1014 | PANTHER | TWO-COMPONENT HISTIDINE PROTEIN KINASE | 15 | 1013 | - | - | |
| Seca3g01120 | 1014 | ProSiteProfiles | Histidine kinase domain profile. | 376 | 677 | IPR005467 | - | |
| Seca3g01120 | 1014 | Pfam | Response regulator receiver domain | 871 | 938 | IPR001789 | GO:0000160 | |
| Seca3g01120 | 1014 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 480 | 675 | IPR003594 | - | |
| Seca3g01120 | 1014 | CDD | HisKA | 368 | 430 | IPR003661 | GO:0000155|GO:0007165 | |
| Seca3g01120 | 1014 | Coils | Coil | 182 | 206 | - | - | |
| Seca3g01120 | 1014 | Gene3D | - | 357 | 434 | - | - | |
| Seca3g01120 | 1014 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 368 | 434 | IPR036097 | GO:0000155|GO:0007165 | |
| Seca3g01120 | 1014 | FunFam | Histidine kinase 5 | 863 | 1014 | - | - |
Showing 1 to 10 of 33 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca3g01120 | - | - | gmx:100819520 | 1675.6 |
Showing 1 to 1 of 1 entries