Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca3g01117 | ATGAAGAATCATCATGTCTACTCTCCAATCATCATAATAATTATTTGGTCTCTAAGTTTCTTCTTGATAGGTATGGCACAGAGAAACGAGACAGTAGTGGTGAAAGTGGGAGCTGTGCTTGATCTTAGTAACGGAATGGTAGGGAAGATGGGGTTAAGTTGCATCAACATGTCCCTCTCAGATTTCTATCTCTCTCATTCTCATTACAAAACCAGGCTCCAACTCATCGTCAGGGACTCCAACAGGGACGTCGTTACCGCCGCTGCTCAAGCCCTGGATCTCGTAAAAAATGAAGAAGTGCAGGCTATCATAGGACCGATAACAACTATGGAGGCAGACTTTATGATCCGGCTTGGAGACAAAGCACATGTTCCAATTGTAACCTTTTCAGCAACAAGCCCTGCTCTTGCTTCGCTTCAAAGTCCATATTTTTTCCAAATCGCACAAGATGATTCGGCTCAAGTGAAAGCTATCACAACAATTATCCAAGCTTTTGGGTGGAAAGAAGTGGTTCTCATTTACATAGACGATAGTTTTGGGGAAGGAGTCATTCCTTTCTTAACCAATGCTCTCCAACAAGCCTATGTTCGAGTTCCCTATCTCAGTGTCATTTCTCTTTCAGCCACCAATGAAGTTATCACTGGAGAGCTTTATAAGTTAATGACTATGCCAACTAGAGTCTTTGTAGTGCACATGGTGCCACGCCTTGGCTCTCGCCTCTTCACCCTCGCGAAGCAAATTGGAATGATGGACCAAGGCTATGTTTGGATTGTAACTGATGGCATGACTAATTTGTTCAGCTCCTTAAACACTTCAGTCATGGAATCAATGGAAGGAGTATTGGGTGTGAGGCCTTATGTTCCAAGAACGAAAGAGCTTAATTATTTTAAAGCTCGATGGAAAAGAAAATTCTTACGAGATAATCCAACACTTGTTGACACAAATTTGAATGTTTTTGGAATATGGGCTTATGATACTACTACAGCATTAGCAATGGCAGTTGAGAAAGTTGGAACCACCAACTTTGGCTTCCACGTGAGCAATTCTTCAAGCAACATTCTTGGTTTTGAAAAGTTTGGCATTGCACAAAACGGTGAGAAGTTGCGTGAAGCCCTCTTGAACACTAGATTTAGAGGACTTGGTGGTGATTTCAATATTCTTGGTGGGAAGTTACAAGCATCAACTTATGAGATAATTAATATGGTTGGTAATGGGGAAAAGAGGGTGGGATTTTGGACGCCTAAAAAGGGACTATCTAGAAATCTTAACTCAAAAGAACCCAAAATATATTCTTCTTCAAAAAACAATCTTGGTCCCATTATATGGCCAGGGGATACATACTCTATTCCAAAAGGATGGGAAATTCCCATAAAAGGCAAGAAGTTGAGGATAGGAGTTCCGATAAAAGAAAAAGATAGTTATACTCAGTTTGTGAAAATAACGCTCGACCCAATTACCAATTCAACAGTGGTCACTGGATTTTGCATTGATGTCTTCAAAGCTGTGCTAGATGTGTTGCCATATGCCTTACCATATGAGTTCATTCCATTTGCAAAGCCCGATGGTGAGATGGCGGGAGATTATAATGAGTTAGTCAGCCAAGTTTATTATGGGGTATTTGACGCTGTGGTAGGGGATACAACGATTATTGGAAATAGGTCAAATTACGTTGATTTCACAATGCCATACACAGAATCTGGTGTGACAATGGTTGTTTTAGTAAAAGATAATAGGAAGAAAAACGCGTGGGCTTTTTTGAAACCACTAACATGGGATCTTTGGGTAACAACTACTTGTTCATTCATATTCATTGGATTTGTTGTCTGGGTCCTTGAACATCGAGTAAACAACAGCTTTAGGGGGCCTCCCTCACATCAAATTGGCACAAGCTTATGGTTTTCCTTCTCAATCATGGTGTTTTCCCATCGGGAGAAAGTGGTGAGCAACTTGGGTAGATTTGTGGTTATTGTATGGGTGTTTGTGGTTTTAATTTTGGTTCAAAGTTACACTGCGAGCCTCACTTCCCTCTTAACAGTTGAACAACTACGCCCAACTGTTACAGATGTCCATCAACTCATCAAGAATAGGATGAATGTTGGTTATCTAAAAGGTTCTTTTGTTTATGGAATTTTGAAAGACTTAGGTTTCCAAGATTTCCAACTCAAAATTTATGAATCTCCAGAAGAATGTAATGAGCTTTTCAAAAAAGGTAGTACAAATGGTGGCATTGATGCTGCGTTTGATGAAGTTCCTTATGTGAAGCACTTTCTTGGAACTTATTGTTCTAAGTATGTCATGGTTGAACCCAGGTTTCGGCTTTGGTTATATTCACAGGTGTTCCCAAAAGGTTCCCCTCTTGTGGCTGACATTTCAAGGGCAATCCTTAATGTGACTCAAGGAGACAAAATGAGAGCAATTGAGAATGCATGGTTCAAGGAAAGCAATTGTGTGGAGTCTAATACAGAAATTTCTTCTAAAAGTCTTGGCCTTGAAAGTTTTTGGGGTTTGTTTCTCGTTGCAGGGATTGCTTCCCTATTAGCACTCCTAATATTTGCATTAACATTCTTATATCAACATAGGCATATTTGGTTAAACAATAATCCTAATACTTCAATATGGAGACGTATTGGAATCTTGATAAGGATATTCGACCAAAGAGACTTGGACTGTCACACATTCAAGAAAAGTGAAATGCAAAATAAAAGTGAAACTAATAGTCCTCATCATGTATTAGGTGTAGTTGAGGCCTCGCCAAGTACACATTGCCCACAAAGTCCATCTAGTCAAACATTTCCTTTTATGGAGACTTTAGTTCAGACCAGGGTGCATGCTAAACCATAA | 2841 | 0.3981 | MKNHHVYSPIIIIIIWSLSFFLIGMAQRNETVVVKVGAVLDLSNGMVGKMGLSCINMSLSDFYLSHSHYKTRLQLIVRDSNRDVVTAAAQALDLVKNEEVQAIIGPITTMEADFMIRLGDKAHVPIVTFSATSPALASLQSPYFFQIAQDDSAQVKAITTIIQAFGWKEVVLIYIDDSFGEGVIPFLTNALQQAYVRVPYLSVISLSATNEVITGELYKLMTMPTRVFVVHMVPRLGSRLFTLAKQIGMMDQGYVWIVTDGMTNLFSSLNTSVMESMEGVLGVRPYVPRTKELNYFKARWKRKFLRDNPTLVDTNLNVFGIWAYDTTTALAMAVEKVGTTNFGFHVSNSSSNILGFEKFGIAQNGEKLREALLNTRFRGLGGDFNILGGKLQASTYEIINMVGNGEKRVGFWTPKKGLSRNLNSKEPKIYSSSKNNLGPIIWPGDTYSIPKGWEIPIKGKKLRIGVPIKEKDSYTQFVKITLDPITNSTVVTGFCIDVFKAVLDVLPYALPYEFIPFAKPDGEMAGDYNELVSQVYYGVFDAVVGDTTIIGNRSNYVDFTMPYTESGVTMVVLVKDNRKKNAWAFLKPLTWDLWVTTTCSFIFIGFVVWVLEHRVNNSFRGPPSHQIGTSLWFSFSIMVFSHREKVVSNLGRFVVIVWVFVVLILVQSYTASLTSLLTVEQLRPTVTDVHQLIKNRMNVGYLKGSFVYGILKDLGFQDFQLKIYESPEECNELFKKGSTNGGIDAAFDEVPYVKHFLGTYCSKYVMVEPRFRLWLYSQVFPKGSPLVADISRAILNVTQGDKMRAIENAWFKESNCVESNTEISSKSLGLESFWGLFLVAGIASLLALLIFALTFLYQHRHIWLNNNPNTSIWRRIGILIRIFDQRDLDCHTFKKSEMQNKSETNSPHHVLGVVEASPSTHCPQSPSSQTFPFMETLVQTRVHAKP. | 947 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca3g01117 | 946 | Gene3D | - | 582 | 711 | - | - | |
| Seca3g01117 | 946 | Gene3D | - | 762 | 818 | - | - | |
| Seca3g01117 | 946 | Pfam | Receptor family ligand binding region | 54 | 404 | IPR001828 | - | |
| Seca3g01117 | 946 | CDD | PBP1_GABAb_receptor_plant | 35 | 422 | IPR044440 | - | |
| Seca3g01117 | 946 | Gene3D | - | 325 | 465 | - | - | |
| Seca3g01117 | 946 | FunFam | Glutamate receptor | 582 | 712 | - | - | |
| Seca3g01117 | 946 | SMART | GluR_14 | 461 | 813 | IPR001320 | GO:0015276|GO:0016020 | |
| Seca3g01117 | 946 | SUPERFAMILY | Periplasmic binding protein-like I | 33 | 444 | IPR028082 | - | |
| Seca3g01117 | 946 | FunFam | Glutamate receptor | 461 | 582 | - | - | |
| Seca3g01117 | 946 | Gene3D | - | 466 | 581 | - | - |
Showing 1 to 10 of 19 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca3g01117 | K05387 | - | tcc:18507124 | 1129.78 |
Showing 1 to 1 of 1 entries