Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01115 ATGTTTCTTTCATCTTTAGCAATATCATGGATCATTTTGGCTTTCATATTCATCCTATCAGCTATCCTGCTGAGGAAACAAAGCCAACATGACCGGAAACAACCACCAGGTCCACCAGCTCTGCCTATTTTGGGCCACCTTCACTTATTGGGGAACCTTCCCCACCGCACCCTTCAAACCTTGTCCAAAAGATATGGCCCCATCATGTCTCTTCGATTAGGACAGGTCCCAATCAGTGTGGTCACATCCCCTGAAGCTGCTGAGCAATTCCTAAAGACCCACGAATCTGTTTTTGCAAGCAGAATAAAAATTGAAGCCTCCAAGTACCTCTCTCATGACTACAAAGGCTTGGTGTTTTCTCATCACACAACACATATTGAGATGAGAGGTGGCAGTAACCCATCTTCATCAAGAGCATTAGGTAGGGGAAACACACCTGCGTGGCTAGGAAATACATGTGGAACACCTGCGTGGCTATATGTTCTGATGATTGAGACATTCTTTGAAGAATGTGGGATCCATGAGAATCGCTTAATAATGAGGGAGAAGATGGTCTTTTGCTTGCAATGTGGCCTTAGCATCTGCCCTAACTGCCTCCTTTCTCACCCCTCTCATCACTCTCTCATCAAGGTGATGAGAATTCATGGACGAGAGGCGGTTCAATTGATTGATTTGGAAAAGCTGATTGATTGTTCCAATATTAAGGTTTGA 711 0.4444 MFLSSLAISWIILAFIFILSAILLRKQSQHDRKQPPGPPALPILGHLHLLGNLPHRTLQTLSKRYGPIMSLRLGQVPISVVTSPEAAEQFLKTHESVFASRIKIEASKYLSHDYKGLVFSHHTTHIEMRGGSNPSSSRALGRGNTPAWLGNTCGTPAWLYVLMIETFFEECGIHENRLIMREKMVFCLQCGLSICPNCLLSHPSHHSLIKVMRIHGREAVQLIDLEKLIDCSNIKV. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01115 236 Pfam Cytochrome P450 35 133 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01115 236 ProSiteProfiles Zinc finger B-box type profile. 171 211 IPR000315 GO:0008270
Seca3g01115 236 PANTHER CYTOCHROME P450 93A3-LIKE 10 123 - -
Seca3g01115 236 SUPERFAMILY Cytochrome P450 28 137 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01115 236 Gene3D Cytochrome P450 20 145 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01115 236 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g01115 236 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01115 Seca-Chr3 19206816 19210090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01115 6 129 Cytochrome P450 AT3G26170 41.600 5.27e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01115 - - aprc:113867069 144.436