Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01112 ATGGCGAGGTTGGAAGAAGCATGTGCTTCTGCTGTGAGGATGACAGGTGACACAGTTGGATCAGGATGCATAGGTGAAGATCCAGCTTTAGATCAGTTCATGGAGGCTTACTGTGAGATGCTCACTATGTATGAGCAAGAACTCTCTAAACCCTTAAAGGAAGCCATGCTCTTCCTTCAAAGGATAGAGTGTCAGTTCAAAAATCTCACTATTTCTCCTTCGAATGTTGGTGATGACCTCTCTCTCTCTCTCTTCTATTAA 261 0.4368 MARLEEACASAVRMTGDTVGSGCIGEDPALDQFMEAYCEMLTMYEQELSKPLKEAMLFLQRIECQFKNLTISPSNVGDDLSLSLFY. 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01112 86 SMART KNOX2_2 20 71 IPR005541 GO:0003677|GO:0005634
Seca3g01112 86 Pfam KNOX2 domain 23 70 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01112 Seca-Chr3 19125754 19126014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01112 1 67 Homeobox Transcription Factor Family AT1G62360 71.642 1.20e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01112 - - lang:109345346 134.035