Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01022 ATGAGAGGGCTCAATAGAGTGATATTTGTAAGCAGAGCCTTAAGAGGCAGCTCCACCGCTGTTGGCAGCTTTCACCGAGTGGCTCCCTATGGGACTTCTAACCTTTACAATCTTGTTGATCACTCAACTCCCTCTGTTGCTGCTCGCAGTGTCACAGTCACAGGGTTTAGGTATTTTAGTTCTGCTGCTGCAACGTCTCTCGCTCAAGACCTCCAGGCGAAGGGCTTCAATCCCAAAGAGGTTGTTCTCTTTCAGTATGAGGCTTGTCCATTCTGCAACAAGGTTAAAGCGTTCATGGACTATTATGATATTCCATACAAAGTGGTGGAAGTAAATCCGATCAACAAGAAGGAGATCAAATGGTCTGACTACAGGAAGGTGCCTATTGTGACAGTTGATGGTGAACAAATGGTTGATTCTTCAGACATAATTGATAAGTTGGTGAAAAGGATACATCCAGATTATGACCTAAATGCAGATGAAGAGAAGAAGTGGCGTGAGTATGTTGGTTATTATCCTTTGCTATTTATTTCTTCTAGTTTATTTGGACTACTCAGATTGCTTACCGCTAGCTCTCTTATTTGGTCAAAATATGGTTGTGCCACTGCTTCCATCATTAGTAACCTTGATTTATCACATGAACATTATGCTGTGACTTGTTATATAGGTGGGTGGATAATCACTTGGTGCATGTTTTGTCACCAAACATTTATCGAACTGTTTCTGAGGCTCTTGAATCATTTGAATACATCACCACTCAAGGCAATTTCAGTTTATCTGAGAGGTTGGTGGCAAAGTATGGTGGGGCTGCAGCTATGTATTTTGTTTCAAAGAAATTGA 840 0.4143 MRGLNRVIFVSRALRGSSTAVGSFHRVAPYGTSNLYNLVDHSTPSVAARSVTVTGFRYFSSAAATSLAQDLQAKGFNPKEVVLFQYEACPFCNKVKAFMDYYDIPYKVVEVNPINKKEIKWSDYRKVPIVTVDGEQMVDSSDIIDKLVKRIHPDYDLNADEEKKWREYVGYYPLLFISSSLFGLLRLLTASSLIWSKYGCATASIISNLDLSHEHYAVTCYIGGWIITWCMFCHQTFIELFLRLLNHLNTSPLKAISVYLRGWWQSMVGLQLCILFQRN. 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01022 279 ProSiteProfiles Glutaredoxin domain profile. 69 165 - -
Seca3g01022 279 SUPERFAMILY Thioredoxin-like 80 161 IPR036249 -
Seca3g01022 279 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 36 169 - -
Seca3g01022 279 Gene3D Glutaredoxin 69 152 - -
Seca3g01022 279 Pfam Glutathione S-transferase, N-terminal domain 83 149 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01022 Seca-Chr3 17333902 17336658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01022 89 163 Glutathione S-transferase Gene Family AT5G16710 37.662 5.49e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01022 K05309 - gmx:100804696 235.728