Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01019 ATGAAGCTACTTTCTCCTCCTCCAACCCTTCCTTCTTCAATGTGTATCTTGCTGCTCCGTTTCACACTATTGTTAGTTGTTTCTTGCAAAACGAAGGCTTTGATGGAACTTCCACCAAATGTTTCGGTTCCAGCAGTGATAGTGTTTGGTGATTCGATCATGGATACGGGCAACAATAACAACAACTTGAAAACGCTTGCTAGATGCAATTTCCCTCCATATGGCAAAGATTTTAAGGGAGGCGTCCCAACCGGTCGATTTGGCAATGGAAAGGTTCCATCAGACTTTATAGTGGAAGAATTGGGTATCAAGGAACTTCTACCAGCATATTTGGATCAAAATATCCAACCTAGCGATCTCGTCACTGGTGTTTGCTTTGCATCCGGTGGTGCTGGCTATGATGCCCTCACATCCGAATTAGCGGTACTATTACTGAATTATAACCAGGCAGCTATATCGTTGTCCGGTCAAATAGATTTGTTCAGAGAATACATGGGGAAGCTAAAAATGCTCGTTGGAGAGGATAGAACAAACTTCATCCTAGCCAATAGTATTTTTCTTGTGGTATCAGGGAGCAATGACATTTCCAACACATACTTTTTGAGTCACGCTAGAGAAGTGCAATATGATATTCCTTCTTACACTGACCTAATGGTTAGGTCAGCTTCGAATTTCTTAAAGGAAATTTATCAACTGGGTGCACGGAGGATAGGAGTATTCAGTGCTCCACCAATTGGGTGTGTACCATTTCAGAGGACAATAGTTGGAGGAATAGTGAGAGAATGTGCAGAAAAATACAACGATGCATCCAAGTTATTTAACAGCAAACTGTCAAAGGAGCTGGCTTCCCTTAATCGCAACTTGCCCAATGCCAGGATGCTTTACCTTGATGTTTACAACCCTCTACTTGACATCATTGTGAATTACCAAAATTATGGTTATAAAGTGGGAGATAAAGGATGTTGTGGCACAGGCGAAGTAGAGGCCGCAGTGTTATGCAACCCTTTGTCTCCTCCGTGTCCTGATGTTGGGGACTATGTTTTTTGGGACAGTTTTCATCCTTCGGAAAGTTGTTACAAGAAGCTCGTTCATCCTATTCTTCAAAAATATCTGTACCAATTCTTCTAG 1128 0.4193 MKLLSPPPTLPSSMCILLLRFTLLLVVSCKTKALMELPPNVSVPAVIVFGDSIMDTGNNNNNLKTLARCNFPPYGKDFKGGVPTGRFGNGKVPSDFIVEELGIKELLPAYLDQNIQPSDLVTGVCFASGGAGYDALTSELAVLLLNYNQAAISLSGQIDLFREYMGKLKMLVGEDRTNFILANSIFLVVSGSNDISNTYFLSHAREVQYDIPSYTDLMVRSASNFLKEIYQLGARRIGVFSAPPIGCVPFQRTIVGGIVRECAEKYNDASKLFNSKLSKELASLNRNLPNARMLYLDVYNPLLDIIVNYQNYGYKVGDKGCCGTGEVEAAVLCNPLSPPCPDVGDYVFWDSFHPSESCYKKLVHPILQKYLYQFF. 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01019 375 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 46 57 IPR008265 GO:0006629|GO:0016298
Seca3g01019 375 Gene3D SGNH hydrolase 37 370 IPR036514 -
Seca3g01019 375 FunFam GDSL esterase/lipase APG 35 371 - -
Seca3g01019 375 Pfam GDSL-like Lipase/Acylhydrolase 46 365 IPR001087 GO:0016788
Seca3g01019 375 CDD SGNH_plant_lipase_like 44 370 IPR035669 -
Seca3g01019 375 PANTHER GDSL ESTERASE/LIPASE EXL3 25 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01019 Seca-Chr3 17263702 17271110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01019 40 368 Pollen Coat Proteome AT1G75910 40.361 3.55e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01019 - - gmx:100793604 613.224