Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01017 ATGAGCAAACACAAACACAAAATGGAAATGTCCATGATTGCTGTGGTCTTTCTGTGTTGTGTCGTGTGTCTCCGTCTTTTTTACACAGCAGAGGCTCTAGTTACTCTGCCAGGGAATGAAACAATCCCAGCACTCATTATGTTTGGCGATTCTATCGTTGACACAGGGAGTAACAATGACCTTACCACGCTCGCTAAGTGCAATTTTCCTCCTTATGGGAGGGATTTCCCAGGCGGGAAACCAACGGGGAGATTCTCCAATGGCAAGGTCCCTTCCGATTTCTTAGCGGAAGCATTGGGAATCAAAGGATTCATACCATCATATCTGAGTTCTAGTTTGCAGCCACATGATCTCCTTACAGGTGTCAACTTCGCTTCGGGTGGCTCAGGATATGATCCTTTGACCCCAAAACTTCAGTCAGTTATACCATTATCTGACCAACTGAGGCTATTCAAAGAGTACATAGAAAAGCTTAAAGGAAATTTTGGTGAAGAAAGAACCAACTTTATCCTATCCAAAAGTTTAGTAATTGTGGTATCGAGCAGCAACGACATTGCCAATTCTTATTTCGCAACTGGAATTAGGAAAATGCAATATGATGTTCCCTCTTATGATGATATGTTGGTGCAAGTAGCCTCTTCTTTCATTAAGGAATTATACGCATTGGGGCCAAGGAGAATAGGGGTTTTTGGTGCACCACCACTGGGATGCGTGCCATTTGAGCGAACACTGTTTGGAGGTATCGAGAGAAAGTGCTCAGAAGAAGTAAACATGGCATCAAAGTTGTTTAATGCTAAATTATCTGCAGAGCTGGATTCCCTAAATCAAAATCTGCCTCAAGCGAAAATTGTCTATATCGATGTTTACAACCCTTTGCTCCATATAATCGAAAATCCCACCAAATATGGTACAATTAATTATATATAA 927 0.4153 MSKHKHKMEMSMIAVVFLCCVVCLRLFYTAEALVTLPGNETIPALIMFGDSIVDTGSNNDLTTLAKCNFPPYGRDFPGGKPTGRFSNGKVPSDFLAEALGIKGFIPSYLSSSLQPHDLLTGVNFASGGSGYDPLTPKLQSVIPLSDQLRLFKEYIEKLKGNFGEERTNFILSKSLVIVVSSSNDIANSYFATGIRKMQYDVPSYDDMLVQVASSFIKELYALGPRRIGVFGAPPLGCVPFERTLFGGIERKCSEEVNMASKLFNAKLSAELDSLNQNLPQAKIVYIDVYNPLLHIIENPTKYGTINYI. 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01017 308 Coils Coil 264 284 - -
Seca3g01017 308 Gene3D SGNH hydrolase 34 307 IPR036514 -
Seca3g01017 308 PANTHER GDSL ESTERASE/LIPASE EXL3 19 304 - -
Seca3g01017 308 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 45 56 IPR008265 GO:0006629|GO:0016298
Seca3g01017 308 CDD SGNH_plant_lipase_like 43 303 IPR035669 -
Seca3g01017 308 Pfam GDSL-like Lipase/Acylhydrolase 46 295 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01017 Seca-Chr3 17170512 17173663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01017 18 306 Pollen Coat Proteome AT1G75910 41.638 4.93e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01017 - - gmx:112997680 429.098