Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01014 ATGCATCATACTATGGTCTTGCGGCGGGAAGCGCCAAAGGTGGGTCCCCTGAATCCAGGTTGGCGATGTATAAAGTGTGTTCCAATTTTGGCGTTTGATGATGCTATTGCTGATGGAGTGGACGTGCTATCTCTATCGCTTGGTTCATTTGCTTTTCTCCGACCCGACTTGATATCGGATCCAATTGCAATCGGAGCATTCCACGCCGTGGAGCGCGGAATCGTGGTGGTCTGCTCCGCCGGGAATGATGGACCTGGCCAAAAGACGGTTGTGAATGATGCTCCATGGATTTTAACCGTTGCAGCCTCCACCATCGACCGGTATTTTCAGTCTAGCGTTGTGTTGGGGGGTAACAAAGTGGTCAAGGGCGAAGCCATAAATTTCTCCCCCCTTTCAAATTCCCCTGACTATCCCCTGCTTTATGGTGAATTTGCCAAGGCGAGTAGCGCTGACTTAGTTCAAGCAAGGCAGTGCCACGCAGAGTCATTAGATAGAAGTAAAGTGAAAGGAAAGATTGTGATCTGTGATGGCAGAAATGATGACTCATATTCAACTGGTGGAAAAATTGACATAGTCAAACAGGTTGGAGGATTAGGGCTTGTTCATATTACTGACCAAAATGGAGCAATAGCATCAAATTCTGGAGACTTCCCAGCAACAGTGGTAACTTCAAAAGATGCTGCCACAATTCTCCAGTATGCTAATTCAACCAGTAATCCAGTGGCAACAATTCTAGCATCATTATCAGTCATTGATTATAAGCCTGCACCCATGGTGGCATCCTTTTCATCAAGAGGGCCTTCAACACTTTCAAAGAGTATTCTCAAGCCTGATATTGCAGCACCAGGAGTTGACATTCTTGCAGCATGGATTGGCAGTGACACAAGCGAGGTTCCAAAAGGGAAAAAACCCTCTCTTTATAACATAATCTCAGGGACTTCCATGGCATGCCCACATGTTTCAGGCCTTGCAGGCAGGATCAAATCTCGGAACCCCACTTGGAGTGCCTCTGCAATCAGATCAGCCATCATGACCTCTGCAACTCAAAGTAACAATTTGAAGGCTCCCATAACAACGGATTCAGGGTCTGTAGCCACACCTTATGACTATGGAGCAGGGGAAATGACAACATCTGGACCATTGCAACCAGGGCTAGTTTATGAAACCAACACCATTGACTACTTGAACTACTTGTGTTACATTGGACTCAACATAACTACGGTCATTAAGGTCATCTCAAGAACTGCCCCTGATAATTTCAGTTGCCCTAAGCATTTGAGCTCTGATCATATTTCCAACATCAATTACCCTTCCATAGCAATCTCCAACTTCAATGGGAAAGAAGCTGTGAAGGTGAGTAGAAGCGTTACAAATGTTGGTGAAAAGGATGAAACAATATACTCCCCCATTGTTGAAGCTCCCAGTGGGGTAACTGTCAAGTTAATTCCAGATAAACTCCAATTTACAAAAAGTAGTAAAAAACTAAGCTACCAAGTTATTTTCTCCTTGACTTCAACCTCCTCAAAGGAAGATCTGTTTGGATCCATTACCTGGAGTAATGGTAAATATATTGTTCGAAGTCCTTTTGTATTAACTAAGTAG 1602 0.4432 MHHTMVLRREAPKVGPLNPGWRCIKCVPILAFDDAIADGVDVLSLSLGSFAFLRPDLISDPIAIGAFHAVERGIVVVCSAGNDGPGQKTVVNDAPWILTVAASTIDRYFQSSVVLGGNKVVKGEAINFSPLSNSPDYPLLYGEFAKASSADLVQARQCHAESLDRSKVKGKIVICDGRNDDSYSTGGKIDIVKQVGGLGLVHITDQNGAIASNSGDFPATVVTSKDAATILQYANSTSNPVATILASLSVIDYKPAPMVASFSSRGPSTLSKSILKPDIAAPGVDILAAWIGSDTSEVPKGKKPSLYNIISGTSMACPHVSGLAGRIKSRNPTWSASAIRSAIMTSATQSNNLKAPITTDSGSVATPYDYGAGEMTTSGPLQPGLVYETNTIDYLNYLCYIGLNITTVIKVISRTAPDNFSCPKHLSSDHISNINYPSIAISNFNGKEAVKVSRSVTNVGEKDETIYSPIVEAPSGVTVKLIPDKLQFTKSSKKLSYQVIFSLTSTSSKEDLFGSITWSNGKYIVRSPFVLTK. 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01014 533 Gene3D - 106 251 - -
Seca3g01014 533 ProSitePatterns Serine proteases, subtilase family, serine active site. 312 322 IPR023828 -
Seca3g01014 533 Gene3D - 398 533 - -
Seca3g01014 533 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 530 IPR045051 -
Seca3g01014 533 SUPERFAMILY Subtilisin-like 29 376 IPR036852 GO:0004252|GO:0006508
Seca3g01014 533 Gene3D Peptidase S8/S53 domain 29 394 IPR036852 GO:0004252|GO:0006508
Seca3g01014 533 ProSiteProfiles Serine proteases, subtilase domain profile. 1 381 - -
Seca3g01014 533 Pfam Fibronectin type-III domain 433 530 IPR041469 -
Seca3g01014 533 CDD PA_subtilisin_like 112 244 - -
Seca3g01014 533 Pfam Subtilase family 31 371 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01014 Seca-Chr3 17115996 17126138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01014 29 532 Subtilisin-like Serine Gene Family AT1G20150 52.838 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01014 K25898 - gmx:100820194 783.867