Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01013 ATGAAAGGAAATCCAGTATTATTGGTATTGTTATTGTACTCTCTTTCCCTGTTTCTTGGAGAGTCAAGCATTCAAGCTGCAGGGAATGACAATGGAGTTTATATTGTGTATATGGGAGCCGCGGATTCTACAAATGCTTCCCTTCGGAATGACCACGCTCGTGTTCTGGACTTGGTGCTTAGAAGGAATGAGAAGGCTCTAGTATGCAACTACAGACATGGTTTCTCAGGCTTCGCAGCTCATCTATCAAAAGAGGAGGCAAACTCAATTGCTCAGAAACCAGGAGTTGTGTCTGTCTTCCCTGACCCAATTCTGAAGCTCCACACAACACGTTCTTGGGATTTCCTCAAATACCAAACTCACGTTAAAATCGACAACGATCCAAACGCGGTCTCTAATTCCTCTTCCTCATCTGACATCGTCATCGGCATATTAGACACAGGTATATGGCCAGAGGCGGCAAGTTTTACAGACAAGGGTATGGATCCTGTTCCATCCGGTTGGAAAGGCACCTGCATGAAATCCAAAGACTTCAATTCATCAAATTGCAACAGGAAGCTAGTTGGAGCAAGGTATTACCCTGATGGGGATGATGAAGATGCCAACACACCAAGGGATTCGTTGGGACATGGGACCCACGTGTCATCCACGGCGGCGGGGACCACCGTGACTGATGCATCATACTATGGTCTTGCTGCAGGGAGCGCCAAAGGTGGGTCCCGTGAATCCAGGTTGGCGATGTACAGAGTGTGCTCTAATTTTGGATGTCGTGGCTCTGCTATTCTTGCGGCATTTGATGACGCTATTGCTGATGGAGTGAACGTGTTGTCGCTCTCGCTTGGTTCACCTGCCTTTGCCCGACCCGACTTGATAACCGATCCGATTGCAATCGGAGCATTCCATGCCGTGGAGCGTGGAATCGTGGTGGTCTGCTCCGCCGGGAATGATGGACCTGACCAAAAGACAGTTGTGAATGACGCTCCATGGATTTTAACCGTTGCAGCCTCCACCATCGACCGGTATTTTCAGTCTAGCGTTGTGTTGGGGGGTAACAAAGTGGTCAAGGGCGAAGCCATAAATTTTTCCCCCCTTTCAAATTCCCCTGACTATCCCCTGGTTTATGGTGAATCTGCCAAGGCGAGTAGTGCTGACTTAGCTCAAGCAAGGCAGTGCCACCCAGATTCATTAGATGGAAGTAAAGTGAAAGGAAAGATTGTGATCTGTGATGGCAGAAATGATGATTCATATTCAACTAGTGAAAAAATTGACATAGTCAAACAGGTTGGAGGATTAGGTCTTGTTCATATTACTGACCAAAATGGAGCAATGGCATCAAATTCTGGGGACTTCCCAGCAACAGTGGTAACTTCAAAAGATGCTGCCACAATTCTCCATTATGCCAATTCAACTAGCAATCCAGTGGCAACAATTCTAGCAACAGTATCAGTCATTGATTATAAGCCTGCACCCATGGTGGCATCCTTTTCATCAAGAGGGCCTTCAACACTTTCAAAGAGTATTCTCAAGGCAAGCACATATAATGATAGTGATAGATAA 1557 0.465 MKGNPVLLVLLLYSLSLFLGESSIQAAGNDNGVYIVYMGAADSTNASLRNDHARVLDLVLRRNEKALVCNYRHGFSGFAAHLSKEEANSIAQKPGVVSVFPDPILKLHTTRSWDFLKYQTHVKIDNDPNAVSNSSSSSDIVIGILDTGIWPEAASFTDKGMDPVPSGWKGTCMKSKDFNSSNCNRKLVGARYYPDGDDEDANTPRDSLGHGTHVSSTAAGTTVTDASYYGLAAGSAKGGSRESRLAMYRVCSNFGCRGSAILAAFDDAIADGVNVLSLSLGSPAFARPDLITDPIAIGAFHAVERGIVVVCSAGNDGPDQKTVVNDAPWILTVAASTIDRYFQSSVVLGGNKVVKGEAINFSPLSNSPDYPLVYGESAKASSADLAQARQCHPDSLDGSKVKGKIVICDGRNDDSYSTSEKIDIVKQVGGLGLVHITDQNGAMASNSGDFPATVVTSKDAATILHYANSTSNPVATILATVSVIDYKPAPMVASFSSRGPSTLSKSILKASTYNDSDR. 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01013 518 Gene3D - 339 484 - -
Seca3g01013 518 CDD Peptidases_S8_3 105 338 IPR034197 -
Seca3g01013 518 SUPERFAMILY Subtilisin-like 108 502 IPR036852 GO:0004252|GO:0006508
Seca3g01013 518 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 108 IPR037045 -
Seca3g01013 518 Pfam PA domain 370 462 IPR003137 -
Seca3g01013 518 Gene3D Peptidase S8/S53 domain 139 510 IPR036852 GO:0004252|GO:0006508
Seca3g01013 518 Pfam Subtilase family 137 502 IPR000209 GO:0006508|GO:0008236
Seca3g01013 518 MobiDBLite consensus disorder prediction 194 216 - -
Seca3g01013 518 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Seca3g01013 518 FunFam subtilisin-like protease SBT1.5 339 484 - -
Seca3g01013 518 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 510 IPR045051 -
Seca3g01013 518 CDD PA_subtilisin_like 345 477 - -
Seca3g01013 518 ProSiteProfiles Serine proteases, subtilase domain profile. 112 518 - -
Seca3g01013 518 ProSitePatterns Serine proteases, subtilase family, histidine active site. 210 220 IPR022398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01013 Seca-Chr3 17093421 17099129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01013 1 514 Subtilisin-like Serine Gene Family AT1G20160 60.000 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01013 K25898 - gmx:100820194 759.985