Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01008 ATGGCCTCATCACCTTCTTCCTCTTCTTCGCTTCCATCCAACGTTGAACAAGTCTGGCAGGACATCAAACTTGCCTCTCTTTCTAATACCTCCATCGCCCCACCAGAAATTGCCTTTCACAAAGATAACATATCATTATCCAGTCATAGTGCCTGCAAATCTCAACAAACTCTGCTCACTCTCACTTCTATGTCTCTCTTACATAAACAGAGCCATCACTCTTTCCTTCCCTCCTTTAACACTTCTTTATCCTTCGATGTTCTGGAATCTTCCACAATACGCCCCCTCCATGGCGAGAAAAAGTCTCAGCAACATATCTATGCCTCCTCTGATCAAAGACATAAGCGCATGATCAAGAATCGAGAATCTGCTCTTCGCTCCAGAGCCAGAAAACAGGAAACCCTCTTTCTCCATTCTCTGTCTCGAATGTGTTAA 435 0.4414 MASSPSSSSSLPSNVEQVWQDIKLASLSNTSIAPPEIAFHKDNISLSSHSACKSQQTLLTLTSMSLLHKQSHHSFLPSFNTSLSFDVLESSTIRPLHGEKKSQQHIYASSDQRHKRMIKNRESALRSRARKQETLFLHSLSRMC. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01008 144 SUPERFAMILY Leucine zipper domain 113 134 IPR046347 GO:0003700|GO:0006355
Seca3g01008 144 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 14 132 IPR043452 GO:0003700|GO:0045893
Seca3g01008 144 Gene3D - 111 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01008 Seca-Chr3 17052389 17052823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01008 61 133 bZIP Transcription Factor Family AT4G35900 52.055 8.12e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01008 K14432 - lja:Lj1g3v2216450.1 79.7221