Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00992 ATGCCATTCACTCAACATCATCCACTTGATACTTCTTCAACCCCTTCTTCTCTTTCCAACACCAACACAACTTCAACCCCTTTTCAATCTCAGGCTTTGATGAGGTCAAGATTCTTGTCACGCTTCCCTGCTAAGTGTAGCATGAGAGCTCCAATGATGCGTTGGACTACTACACTCCATGCTCGCTTTGTTCATGTCGTTGAGCTCTTGGGTGGCCATGAAAGGATCTATGCATCAAATCATCCTTTTTCCTCTTTCAATTAA 264 0.4356 MPFTQHHPLDTSSTPSSLSNTNTTSTPFQSQALMRSRFLSRFPAKCSMRAPMMRWTTTLHARFVHVVELLGGHERIYASNHPFSSFN. 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00992 87 Gene3D - 50 81 - -
Seca3g00992 87 MobiDBLite consensus disorder prediction 1 30 - -
Seca3g00992 87 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 3 75 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00992 Seca-Chr3 16740367 16740630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00992 32 75 G2-like Transcription Factor Family AT5G16560 72.727 4.00e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00992 - - gmx:100816381 116.701