Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00974 ATGAACAGGGGATGTGATGGACTTGGGCCACGAGAACTGGATGATCAAGTTAATAGTATAAAGGCTGAAGTTGCGAGTCTATATGCTGAGGAATGCAAACTTGACGATTGTATAAGGGAAAAGCAGGAGCTTCTAAGAAACCTGGAGAAGACAGAAAACTCTCAAAAGTATGAACTTCTGACAACTTGTCTTATATTTGAGTTGGATTTCTTACTGTTTCATTACATGATAATGAGCTTCCTTGATCATTAG 252 0.3849 MNRGCDGLGPRELDDQVNSIKAEVASLYAEECKLDDCIREKQELLRNLEKTENSQKYELLTTCLIFELDFLLFHYMIMSFLDH. 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00974 83 Coils Coil 34 54 - -
Seca3g00974 83 SUPERFAMILY E2F-DP heterodimerization region 15 62 IPR037241 -
Seca3g00974 83 Gene3D - 11 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00974 Seca-Chr3 16371088 16373954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00974 3 61 E2F-DP Transcription Factor Family AT1G47870 45.763 7.02e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00974 K06620 - gmx:100811650 104.375