Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00964 ATGTCTGGGAGACTCGGAAAAAGCAGCAGATCAATCCGCCACATCGTGAGGCTCCGGCAAATGCTGCGGCGGTGGCGGAACAAGGCCCGCATGTCAGCCCATAGATCACCGCCTGATGTTCCTGCGGGACACGTGGCGGTGTGTGTGGGCACCAACTACAAGAGATTTGTGGTGCGCGCAACCTACCTGAACCACCCCATCTTCGAGAAGCTACTGGTTCAAGCAGAGGAAGAGTACGGGCTCTCAAACAATGGTCCCCTCGCCATTCCCTGCGACGAACTGCTCTTCGAAGAGATCATCCGGTTTATTTCACGGTCCGGTTCGTGCATCAAGAATAAGAATAACAACCTGGACTTATACCCCGAGTCTCGACCGCTACTCACTCACAATTCACAAATAACAAAACTATTTGGTGGACCGGAATGA 426 0.5305 MSGRLGKSSRSIRHIVRLRQMLRRWRNKARMSAHRSPPDVPAGHVAVCVGTNYKRFVVRATYLNHPIFEKLLVQAEEEYGLSNNGPLAIPCDELLFEEIIRFISRSGSCIKNKNNNLDLYPESRPLLTHNSQITKLFGGPE. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00964 141 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 99 IPR003676 GO:0009733
Seca3g00964 141 Pfam Auxin responsive protein 17 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00964 Seca-Chr3 16091023 16091496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00964 5 108 Calmodulin-binding Proteins AT4G34750 56.604 4.37e-38 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00964 K14488 - gmx:100794795 195.282