Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00958 ATGGATGTTGAAAATTCCCATTACATTGATGGTCAAACTACTTTGATACCAATTACACCTATTGAAGATGAAGATGCGGCAGCAGATATAGTATCTGATTCCTTGGAACGACAGTCTGTCGAATTACCTCCTGGTATATTGAAGGGTTCAAATTCTGCTACAAGCATCCAGTTAGCTCATGGTCTAGTGTCTGATGTAGCTGCTGCATCGGTTGCTTTAACTAACATAGTGAAGAGCAATGAGCATGGAAATTTGATTGACCATGAATTACTAAAAAATATTCTCAACAATCCAGAAGTAATTGAGAAGTTGGTTAGAGATTATGGAGTTACTAATAATTCACAGCATGTACATAATGTGGGATCATCTTCAGTAGCTTTTTCACATCCTCCTATTCCTATTAATCAAGGAGAAACCACTACACCTTCGTCAGTTGCTTTTTCAGCCACTTCTTCCTATAATCACCCAACTGGAGGTCAGGTGGCAACTGTTTCTAGCCAATGGCATACTAGGCCTGCAGTGAGTTCAGCTACTGTTTCTTCTTCTGCTGAGGTCCCTTCAACTAAAGATGTAAACTACTATAAGAGCTTAATTCAACAACATGGAGGAGACAAACAAGAAACACTTCCATACTCCAGTAATCGTCAGATCCAGCAGCCAGTAACAAACTACGAGACACCATACAATATTAGAACAAAAGGGTCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTTAACAGTTCTAGAGGATGTCGGAATGGTGCTAACTGTGCATACCAGCATGATGCATCATTTCAGCCACGAGGCAATAATGTATCTGGGATACAAAGTTCAAAGAGAATGAAAATGGATAATGAGATTAGCAGTTAA 873 0.3895 MDVENSHYIDGQTTLIPITPIEDEDAAADIVSDSLERQSVELPPGILKGSNSATSIQLAHGLVSDVAAASVALTNIVKSNEHGNLIDHELLKNILNNPEVIEKLVRDYGVTNNSQHVHNVGSSSVAFSHPPIPINQGETTTPSSVAFSATSSYNHPTGGQVATVSSQWHTRPAVSSATVSSSAEVPSTKDVNYYKSLIQQHGGDKQETLPYSSNRQIQQPVTNYETPYNIRTKGSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGNNVSGIQSSKRMKMDNEISS. 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00958 290 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 124 286 - -
Seca3g00958 290 MobiDBLite consensus disorder prediction 269 290 - -
Seca3g00958 290 ProSiteProfiles Zinc finger C3H1-type profile. 237 265 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00958 Seca-Chr3 16026511 16031887 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Seca3g00958 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00958 - - gmx:100783321 414.075