Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00928 ATGGCTGATCATTCAGGATCAGCCTCTTCTTCCAGTAGAATAATGCAATGGTGCTCCATCCCAGAACGACTTCAACTGCATGCGGCCATGTTGGCCCTGCAGTTTGGCTATGCTGGTTTCCATGTCGTCTCAAGAGCTGCCCTTAACATGGGCGTCAGCAAACTTGTTTTCCCAGTCTATCGGAATATCATTGCTTTTCTCTTACTCCTTCCTTTTGCCTACTTCTTGGAAAAGAAGGAGAGGCCTGCAATTACTTTAAACTTCCTCTTACAGTTCTTTCTTCTCGCCCTTGTCGGGATTACAGCCAACCAAGGGTTCTACTTGCTTGGATTGGACAACACATCCCCAACCTTTGCATCAGCCATACAAAACTCTGTCCCAGCCATTACATTTCTCATGGCAGTTATACTCAGGATAGAGCAAGTGCGGTTGAACCGAAAGGATGGGATTGCGAAGGTGGCGGGAACGGTATTTTGTGTTGCTGGGGCAACGGTGATTACACTTTACAAGGGGCCAACAATATACAGTCCAGTTCCACCACAGCTAAACAACAGTTACAGCACACCAGAGATATTTGGGTCACTCTCACTGGGAGATGCAAAGGGAAAGAACTGGACACTTGGGTGCCTTTACCTCATAGGGCATTGTTTGTCGTGGTCTGGTTGGCTTGTGTTGCAAGCTCCAGTGCTGAAGAAGTACCCAGCACGCCTCTCTGTTACTTCCTACACATGCTTCTTTGGACTCATCCAATTTCTTGTTATTGCTTTGATCGTTGAAAGAGATGCTCAGGCTTGGATGTTCCACTCTGGTGGAGAACTTTTCACAATTCTATACGCGGGAGTGGTGGCATCTGGAATTGCCTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTCGTTGCTGTGTATCAACCTGTTCAGACTCTTGTTGTCGCTATTATGGCTTCCTTTGCTTTAGGCGAAGAGTTCTACTTGGGAGGGATAATTGGGGCAGTATTGATCGTTGTGGGACTGTACCTAGTGTTGTGGGGTAAAAGCGAAGAGAAGAAGTTTGCAAAGGAACAGGCTGCGATTACATCCACTACTCCTGAACATAGCAGCATTAGATCCGCAAGCCATGCCAAAGCATCAATCACTCAACCTCTTCTCCTCCCTTCATCAACGGAAAATGTCTAA 1185 0.47 MADHSGSASSSSRIMQWCSIPERLQLHAAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLLPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVILRIEQVRLNRKDGIAKVAGTVFCVAGATVITLYKGPTIYSPVPPQLNNSYSTPEIFGSLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLVIALIVERDAQAWMFHSGGELFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSEEKKFAKEQAAITSTTPEHSSIRSASHAKASITQPLLLPSSTENV. 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00928 394 PANTHER WAT1-RELATED PROTEIN 28 358 IPR030184 GO:0016020|GO:0022857
Seca3g00928 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 60 170 - -
Seca3g00928 394 Pfam EamA-like transporter family 30 167 IPR000620 GO:0016020
Seca3g00928 394 Pfam EamA-like transporter family 207 345 IPR000620 GO:0016020
Seca3g00928 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00928 Seca-Chr3 15279555 15282763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00928 1 394 Nodulin-like Gene Family AT1G75500 74.559 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00928 - - gmx:100786714 652.129