Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00904 ATGTCAGTGTTGGAGAAGGTGATTGCTATCGATCCTAGAATGGATGCCTCTCTGCTTAGACTTCACTTTCACGATTGTTTTGCACAGGTTAACTTAATTGCATTTCAGGGCTGCGACGCATCAATTTTGTTGGATGATAGCACGACAATTGTTGGTGAAAAGAATTCTGGACCAAACAAAAATTCCATAAGAGGTTTTGAAGTGATTGATGATATCAAATCCAAGTTAGAAGAAGCATGTCCTCATACTGTCTCCTGCGCAGACATAGTCGCCCTTGCTGCCAGGGGCTCCATTTTGCTTGAACTTCCATTAGGCAGGAGAGACTCAAAAATAGCAAGCTTAAGCCTCTCAAATAAAAGCATTCCCCCTCCAAATTCCACCATTCAAACTCTCATAACATTTTTCAAACGTCAAGGTCTTGATGAAGTTGACCTTGTCGCCCTCTCTGGTGGGCATACAATTGGGATGGCAAGATGTGGAACATTCAAACAGAGGCTGTACAACCAATCAAATGAGACTCTAGAGAAATCCTTCTACTTTGGTTTGAAAACAGTGTGCCCAAAGTCAGGTGGTGACAATAATATTGTTCCCTTCGACTATGGCTCCCCAAGAAAATTTGATAATTCCTACTTCAAACTTATACTTTGGGAAAAGGGACTACTTAATTCAGATGAGGTGCTTTTGACGGTGAATTCTACGGTGAAGTAG 708 0.4153 MSVLEKVIAIDPRMDASLLRLHFHDCFAQVNLIAFQGCDASILLDDSTTIVGEKNSGPNKNSIRGFEVIDDIKSKLEEACPHTVSCADIVALAARGSILLELPLGRRDSKIASLSLSNKSIPPPNSTIQTLITFFKRQGLDEVDLVALSGGHTIGMARCGTFKQRLYNQSNETLEKSFYFGLKTVCPKSGGDNNIVPFDYGSPRKFDNSYFKLILWEKGLLNSDEVLLTVNSTVK. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00904 235 CDD secretory_peroxidase 2 233 IPR033905 GO:0004601|GO:0042744
Seca3g00904 235 PRINTS Haem peroxidase superfamily signature 15 29 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g00904 235 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g00904 235 PRINTS Haem peroxidase superfamily signature 96 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g00904 235 PRINTS Haem peroxidase superfamily signature 144 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g00904 235 ProSiteProfiles Plant heme peroxidase family profile. 1 235 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g00904 235 Gene3D - 3 121 - -
Seca3g00904 235 Pfam Peroxidase 3 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g00904 235 ProSitePatterns Peroxidases proximal heme-ligand signature. 144 154 IPR019793 -
Seca3g00904 235 PANTHER PEROXIDASE 72-RELATED 2 233 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g00904 235 Gene3D Peroxidase, domain 2 122 233 - -
Seca3g00904 235 PRINTS Plant peroxidase signature 64 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g00904 235 PRINTS Plant peroxidase signature 143 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g00904 235 PRINTS Plant peroxidase signature 197 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g00904 235 PRINTS Plant peroxidase signature 83 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g00904 235 PRINTS Plant peroxidase signature 213 230 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g00904 235 PRINTS Plant peroxidase signature 17 37 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g00904 235 FunFam Peroxidase 122 235 - -
Seca3g00904 235 SUPERFAMILY Heme-dependent peroxidases 2 233 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00904 Seca-Chr3 15069959 15071258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00904 1 231 Peroxidase AT1G44970 68.595 9.13e-111 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00904 K00430 - tcc:18591452 356.681