Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00865 ATGCAATACGAATACGAGAATTATGATCCATCGTTTCCTGACCAACCTGTGGTTGACCAATACCTCCCAATTTGGGCCAACTTACCAGCCTTCAGAACCAAACCAGCCTTCATTTGGGCTGAAGAATTGGTCACCTCCACACCCCTCCTCCTCACCTATGAACAACTCAATGCCTCTGTTCAAGTCATCTCTTCTCAACTACTCGTTCCACTACAAAGAGGTGACACAGTCCTGCTTCTGTGCTCTCCAGGACTGGACTTAGTTGAGGTCATTTTTGGGTGTCAAAGGGCTGGTCTTTTGAGTGTCCCTATCATCCCTCCTCACCCTTCTTTTGCTAATCAAAACTATCACCACCTCATAAGGGCCATTTCACAGACCAAGCCTAAAGCTGCCATTGCTCACCCTCATTACATATCAAGCATTCAACACTACATCTCTTCCTCCCACAACAACAACAAACTTGCTCACATGTTACAAAGCCTCCACTGGATTTCCATTGATGATGTCAAAAGTAGCAACGTTAATTCAAGTAACTGTGACTCCCTGTCATACAATGGTTGCAAAGCAAATGAAGTTTATTTGGTTCAATACACCTCTGGTGCCACTGGGATTCCAAAACCTGTGCTTGTCACAGCTGGATTAGCTTCTCATAACGTTAGGTCTGCAAGGAAAGCTTATGATCTTCATCCAAACAGTACTATTGTTTCATGGCTTCCTCAGTATCATGATTGTGGCCTCATGTTTCTGTTGCTAACAATTGTATCTGGAGCTACTTGTGTTCTCACATCGCCAACTGCGTTCATCAAACGCCCAAGACTCTGGCTTGAGTTGATGTCAGAATTCAAGGCAACATGCACCCCTGTTCCATCATTCACATTGCCACTGGTTGTCAAGCGTGGAGGGATTGACAAAGGAACTTTACCCATAAATCTATCAACTTTGAAGAACCTTATAATCATAAACGAACCAATCTACACAGATTCAGTGGAAGAATTTGTTCAAACCTTTTCACCATTTGGGTTAAGTCCCTCATCTCTCTCTCCTTCTTACGGGTTAGCAGAGAATTGTACCTTTGTTTCAACTGCATGGAGGAGTGATAGAGACACTGACACCTTTCCAACTCACAACAAGCTGTTGCCAGTTGCAAGGCTCTCCTCACAGAACAGAAATGAGGAACAAGAAGATGTGGAAATCATGGTTGTTGATGAAGAAACACTTGAGCCAGTTGAGGATGGTGTTGAAGGAGAAATTTGGGTTTCATCACCAAGCAATGCCTCTGGTTACTTGGGTCACCCTTCTTTAACAAGGGAAGTGTTTCATGCAAGACTAAGAAACATGGTTCGAAGGTACTTTCTTCGAACAGGTGATAGGGGAATTGTGAAAGGAGAAAGCAGGTATCTTTTTGTTACTGGTCGCTGTCAAGAAGTTATCAAGCTACAAAATGGTGAAAAAATTCATCCTCATTATATAGAGACTGCGGCTTATAACAGTTGTTCGAAGTTACTAAGAGGAGGTTGCATTGCAGCGTTTGAAGTTTCAACAACTGTTGCAGTTGTGGCAGAGATGCAGAGGATGGAAAAAGAGATGGATATTGGGGTATTGAGGAGAACTTGTCAAGGAATTAGAGAAGGTGTTATGAGGAAAGAGAAGGTAGAGGTTGGATGGGTGGTTTTGGTTAAGAGTGAAAGCGTTCCGAAAACCACTTCTGGAAAATTACAAAGATGGGTAGCTAAGGAGAAGCTTCTTGCAGGAAAAATGGTTATTTTGATGGAGGTGCGATTTGGAAAAGATGTGAGAGGAACACAAGAGTTAATAAGAGTGGCTAAGGAAGGGAAGTGTTCACATTTATGTGCAGAAACTCGTGGCTCATTGATGTCATATCTATGA 1887 0.4277 MQYEYENYDPSFPDQPVVDQYLPIWANLPAFRTKPAFIWAEELVTSTPLLLTYEQLNASVQVISSQLLVPLQRGDTVLLLCSPGLDLVEVIFGCQRAGLLSVPIIPPHPSFANQNYHHLIRAISQTKPKAAIAHPHYISSIQHYISSSHNNNKLAHMLQSLHWISIDDVKSSNVNSSNCDSLSYNGCKANEVYLVQYTSGATGIPKPVLVTAGLASHNVRSARKAYDLHPNSTIVSWLPQYHDCGLMFLLLTIVSGATCVLTSPTAFIKRPRLWLELMSEFKATCTPVPSFTLPLVVKRGGIDKGTLPINLSTLKNLIIINEPIYTDSVEEFVQTFSPFGLSPSSLSPSYGLAENCTFVSTAWRSDRDTDTFPTHNKLLPVARLSSQNRNEEQEDVEIMVVDEETLEPVEDGVEGEIWVSSPSNASGYLGHPSLTREVFHARLRNMVRRYFLRTGDRGIVKGESRYLFVTGRCQEVIKLQNGEKIHPHYIETAAYNSCSKLLRGGCIAAFEVSTTVAVVAEMQRMEKEMDIGVLRRTCQGIREGVMRKEKVEVGWVVLVKSESVPKTTSGKLQRWVAKEKLLAGKMVILMEVRFGKDVRGTQELIRVAKEGKCSHLCAETRGSLMSYL. 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00865 628 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 8 592 - -
Seca3g00865 628 Gene3D - 477 592 IPR045851 -
Seca3g00865 628 Gene3D - 5 473 IPR042099 -
Seca3g00865 628 Pfam AMP-binding enzyme 34 480 IPR000873 -
Seca3g00865 628 SUPERFAMILY Acetyl-CoA synthetase-like 29 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00865 Seca-Chr3 14394507 14396393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00865 187 574 Monolignol Biosynthesis Gene Families AT4G19010 26.368 1.67e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00865 - - gmx:102666455 952.199