Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00847 ATGGCTAAACGCTTCAAGCTGAAATTCACGGTCCCTTTATTTCAAATGTGTCGCTCAAAAGACCTTTCCACTTTCCCAGGAAATCCAGTTCCCGCCATATACCGTCTTTCTCCTGTGAACCCCAAAGCACGTGACATAGGGTACCCTACCCTACCCGGTCCGCCACCGTCATCACCGGAAGGCAAGGTGTCCTCAAAAATCATGTCCATCGCCCAAGGATGCCAAATGTGCCGTGATAAGGACAATAAAGTAAAATCCAAAGGGCGTAAAAGCACATCAAGCGTTCCGTCAAGGAGGAGTAACTTTCTAATAGACAGCACCAACGAAGAAGAAAGTGAAACTCTGATTTCTTGCTTGACAAGCTTCTCCGACGAGATGGTCCTTTCTCCCGGTAACAAAACGGAGAAAGATTTGATGAGTAGCAGGCATAGAAGGAAGGTGAGCAGCGTAAAGAAGGTTCAGAAAATGAGGTTTCACAGTGTGGAGAACAGAGGAGGAACAGAGACGAAGCAGCAGGTGAAGAAGAAGGTTATGTCAAGGTCATCATCATCAATGAGTATGGAGGGGAAGGTGAAGGAGAGCTTTGCGGTGGTTAAAAAGTCGAAGGATCCGTATGAAGACTTCAAGAAATCGATGGTGGAGATGATAGCGGAGATGGAGATGTCTGAGGCAGAGGACTTGGAGCAACTGTTGCAGTGTTTCCTGGCTTTGAACTCTCGGAGTTATCATGCAGTAATTGTGCGAGCTTTCATGGAAATCTGGCAACAGATGTTCACTTGGAACCCTACGTCGATTAAAAATCTCCAATCAGATGTGGAAAAGTAG 825 0.463 MAKRFKLKFTVPLFQMCRSKDLSTFPGNPVPAIYRLSPVNPKARDIGYPTLPGPPPSSPEGKVSSKIMSIAQGCQMCRDKDNKVKSKGRKSTSSVPSRRSNFLIDSTNEEESETLISCLTSFSDEMVLSPGNKTEKDLMSSRHRRKVSSVKKVQKMRFHSVENRGGTETKQQVKKKVMSRSSSSMSMEGKVKESFAVVKKSKDPYEDFKKSMVEMIAEMEMSEAEDLEQLLQCFLALNSRSYHAVIVRAFMEIWQQMFTWNPTSIKNLQSDVEK. 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00847 274 NCBIfam uncharacterized plant-specific domain TIGR01568 195 257 IPR006458 -
Seca3g00847 274 Pfam Transcriptional repressor, ovate 201 258 IPR006458 -
Seca3g00847 274 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 91 258 IPR038933 GO:0045892
Seca3g00847 274 MobiDBLite consensus disorder prediction 89 106 - -
Seca3g00847 274 MobiDBLite consensus disorder prediction 78 106 - -
Seca3g00847 274 ProSiteProfiles OVATE domain profile. 197 256 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00847 Seca-Chr3 14101273 14102097 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca3g00847 Ovate 3.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00847 - - gmx:102662518 324.324