Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g00832 ATGACTTCGGACGGAGCAACTTCTGCGGCGAACAATCGGAGGAAGCCGTCGTGGAGGGAGAGGGAGAACAACCGGAGGAGAGAGAGGCGGAGAAGAGCCATAGCAGCAAAGATATACACTGGACTTAGGGCTCAGGGGAATTACAACTTGCCCAAACACTGTGATAACAATGAGGTCTTGAAGGCTCTCTGTGCTGAAGCTGGTTGGACCGTGGAAGAAGACGGCACCACCTATCGCAAGGTAGGATCCAGGCCAGCACCTCCAGGAGATGGTGCAGGAACTTCCACCAGAAACACCCCTTTTTCTTCACAAAATCCAAGTCCTCTTTCGTCATCTTTTCCCAGCCCAATCCCATCCTACCAAGTTAGCCCCTCCTCCTCTTCCTTTCCAAGCCCCTCTCGTTTGGATGTTAACAACGCATCAAACCTCATTCCATACATTAGGACTGTGTTCCCTGCCTCACTCCCTCCTTTAAGAATATCAAACAGTGCCCCTGTAACGCCACCTCTATCATCACCAACCTCAAGAAATCCTAAACCAATTCCCACATGGGAATCAATTGCCAAGGCATCTATGGGATCCTTCAATCACCCTTTCTTTGCAGCTTCTGCCCCTGCTAGCCCATCACATCGTCACCTTTATACCCCACCTACCATACCTGAATGTGATGAGTCTGACACTTCCACTGTTGAGTCTGGCCAGTGGTTGAATTTCCAAGCCTTTGCACCTTCTGCACCTGCGATGCCTATCTCCCCCACTCTGAACTTTATTAAACCTGCAACTGCAAGTCAGCAGCAAAACCTGCAGCCTGATAATAACAGAATCCAAGAAATGAGAAGCTCAGAGGCAGAGTTTGGGGTACCGGTCAAGCCTTGGGTTGGGGAAAGGATTCATGAAGTGGGATTGGATGATTTGGAGCTCACACTTGGAAGTGGGAAGGCACCTAGTTAG 951 0.4995 MTSDGATSAANNRRKPSWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWTVEEDGTTYRKVGSRPAPPGDGAGTSTRNTPFSSQNPSPLSSSFPSPIPSYQVSPSSSSFPSPSRLDVNNASNLIPYIRTVFPASLPPLRISNSAPVTPPLSSPTSRNPKPIPTWESIAKASMGSFNHPFFAASAPASPSHRHLYTPPTIPECDESDTSTVESGQWLNFQAFAPSAPAMPISPTLNFIKPATASQQQNLQPDNNRIQEMRSSEAEFGVPVKPWVGERIHEVGLDDLELTLGSGKAPS. 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g00832 316 MobiDBLite consensus disorder prediction 1 31 - -
Seca3g00832 316 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 7 313 IPR033264 GO:0003700|GO:0006351|GO:0009742
Seca3g00832 316 MobiDBLite consensus disorder prediction 76 133 - -
Seca3g00832 316 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 139 IPR008540 -
Seca3g00832 316 MobiDBLite consensus disorder prediction 92 133 - -
Seca3g00832 316 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g00832 Seca-Chr3 13902727 13904888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g00832 1 314 BZR Transcription Factor Family AT1G75080 66.471 1.49e-122 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Seca3g00832 BES1_N 4.3e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g00832 K14503 - gmx:100803869 459.529